Transcript Information: S_Transcript_186992.p1


Annotated TAIR IDAT2G30320.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:12925728-12927896 | Reverse length=510
E-Value3.9E-172
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.080708065489
Replicate 215.965436807074
Replicate 319.649896990891
Condition 2: 8 Hour
Replicate 119.658132528703
Replicate 221.192242075087
Replicate 322.090969336072
Condition 3: 24 Hour
Replicate 116.085777843074
Replicate 215.658633452749
Replicate 316.600691044822


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_186992.p1 GENE.S_Transcript_186992~~S_Transcript_186992.p1 ORF type:complete len:550 (+),score=90.70,PseudoU_synth_1|PF01416.16|4.4e-15,PseudoU_synth_1|PF01416.16|5.5e+02,PseudoU_synth_1|PF01416.16|0.00018 S_Transcript_186992:136-1785(+)
ATGGCGGGGTCGTCTCTCCGGCTTCCGATGAGGAAGGGTATTGGTATTGGTATTGGTATTGGGAGTGGATGTTGGTCTTCTCCACTCTCCGTCTCCTGTAGTCGCCCTTCTCCCTGCAATTGGACCCACCGCATTGGCTTCAGTATACTGGCAACCCAGTTTTCGGTGTCCCCTGCAAATTTTGACGAAACCCTCGCTACGATTCAAGTCCCTGCTAGTGCCCCCCCTTTCTCTGAGTCTCAGCCTGGGACCTCTAATAATACTAAGTGGGAAGGCTTCCTCAAGAAGAAAGTGGTCATGCGTGTCGGCTATGTTGGTACCAACTACAAAGGCCTGCAGAAGCAGCACGAAGACAACATTCGCACTATCGAAGAAGCCTTGGAAACTGCCCTCTACAAGGCTGGTGGCATTCGCGACAGTAATTTTGGAAATTTGCACAAAATCGCCTGGGCTAGAAGTAGCCGCACTGACAAAGGAGTACATTCACTAGCAACTACAATATCTTTGAAGTTGGAAATTCCTGACTATGCATGGAGGGATGATCCTAATGGTATCGTCCTTGCAAACCATGTCAACTCTCACCTCCCTGATGATATTAGGGTTTTCAGTATTTTACCCTCTAAGAGGAGCTTTGATCCTCAGAGAGAATGTGATATTAGAAATTATTCTTATCTCCTTCCTGCCGACATTATTGGAATAACAACCAACTCTAGCACTGCTGAAATTGATGATCACATATTGGACTTCAATGCCATTCTCAACACTTTTGAGGGAGAACATCCTTTTCATAACTATACGGCAAGATCAAAATACAGAAGACGGTCATCTAAAGGCCGTGCTGATAGAAGGCACAAATTATTGAATAAGGTTCTATCTGTTGAGGACTATGAAAAGTCTATTAATGATCCATTGACTGATGGAGCATTGATCAGAAATTCCCTATATGATAGTGATTCTAACGAACTGGTTGTTTCCGAAGATGGGCATAGGGATGAGTCAAGCAGTGATAAGCCTGCTACAGCTATACATGCGAGATGGCTTCATGAACGTGATGATGAGGATAGGCTTAGTTCTGCTCACTGGAGGAGGATATTTCAGTGTTCCTGTGGCAAACTGGATACGTCACTTAACAATGCTTTTGTGGAGCTCTCAATATGCGGCGAGTCTTTCATGCTACACCAGATCCGCAAAATGGTTGGTACTGCTGTGGCAGTTAAGCGTGGTTTGCTTCCCAGAGATATTCTTAAATTGTCACTCAACAAGTTCTCGAGAATCGTCCTGCCCCTTGCTCCGTCTGAAGTTTTGTTGTTGAGAGGGAATGACTTTAAATTGAGAAAAATTGCTGGCGACACAAGAAGGCCTGAGATGCACATTTTGGTTGATTCAGAAGAAATTCAAAAAGAAGTTGATAGGTTTTATAAGAGTTTACTGCTGCCTCAGGTTTCTATGTTTTTGGACACTTCTGAGTCTCCCTGGAAGGAATGGCTTGTGAATTTGGATGACAATGCTGGCATACCAGAATCTGAGTTGAATGAAGTCAGAACTGCTTGGAATCTGTGGAATGATGAATTCCAAAACCGAGTCCTTGTTCAAAAGGTGAGTTTTTCCTTGGCCAATGTTTATTACTCATTAGTATATCACAGCGGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_186992.p1 GENE.S_Transcript_186992~~S_Transcript_186992.p1 ORF type:complete len:550 (+),score=90.70,PseudoU_synth_1|PF01416.16|4.4e-15,PseudoU_synth_1|PF01416.16|5.5e+02,PseudoU_synth_1|PF01416.16|0.00018 S_Transcript_186992:136-1785(+)
MAGSSLRLPMRKGIGIGIGIGSGCWSSPLSVSCSRPSPCNWTHRIGFSILATQFSVSPANFDETLATIQVPASAPPFSESQPGTSNNTKWEGFLKKKVVMRVGYVGTNYKGLQKQHEDNIRTIEEALETALYKAGGIRDSNFGNLHKIAWARSSRTDKGVHSLATTISLKLEIPDYAWRDDPNGIVLANHVNSHLPDDIRVFSILPSKRSFDPQRECDIRNYSYLLPADIIGITTNSSTAEIDDHILDFNAILNTFEGEHPFHNYTARSKYRRRSSKGRADRRHKLLNKVLSVEDYEKSINDPLTDGALIRNSLYDSDSNELVVSEDGHRDESSSDKPATAIHARWLHERDDEDRLSSAHWRRIFQCSCGKLDTSLNNAFVELSICGESFMLHQIRKMVGTAVAVKRGLLPRDILKLSLNKFSRIVLPLAPSEVLLLRGNDFKLRKIAGDTRRPEMHILVDSEEIQKEVDRFYKSLLLPQVSMFLDTSESPWKEWLVNLDDNAGIPESELNEVRTAWNLWNDEFQNRVLVQKVSFSLANVYYSLVYHSG*

Click here to download the sequence:
Link to NCBI Protein BLAST