Transcript Information: S_Transcript_187009.p1


Annotated TAIR IDAT1G16190.1
Annotated Gene NameRad23 UV excision repair protein family
Annotated Gene Symbol(s)RAD23A
Annotation TypeOrtholog
Chromosome Positionchr1:5543267-5545892 | Forward length=368
E-Value2.1E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7680678690925
Replicate 29.998492645915
Replicate 310.844605112829
Condition 2: 8 Hour
Replicate 113.018871242295
Replicate 215.836252407896
Replicate 312.134864554147
Condition 3: 24 Hour
Replicate 18.9179486909167
Replicate 28.5732021318767
Replicate 39.2575294071213


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_187009.p1 GENE.S_Transcript_187009~~S_Transcript_187009.p1 ORF type:5prime_partial len:267 (+),score=71.61,XPC-binding|PF09280.7|2.8e-18,ubiquitin|PF00240.19|3.7e-18,UBA|PF00627.27|3.6e+03,UBA|PF00627.27|1e-13,Rad60-SLD|PF11976.4|7.1e-07 S_Transcript_187009:1-801(+)
AAGATGAAGATTTTCGTAAAAACCCTGAAAGGAAGTCACTTCAACATTGAAGTAAATCCTCAAGATACGGTTGCTGATGTGAAGAAAAACATTGAAACTGTGCAAGGAGCAAATGTCTATCCTGCTTCACAACAGATGCTTATTCACCAGGGAAAGGTTCTCAAAGATGACACTACATTGGAAGAAAACAAAGTTGCTGAAAATAGTTTTATTGTTATTATGCTGACGAAGATCAAGGGTTCATCTGCAGAGGGATCAAAACCAGCAGCAGCAGTAGCTTCACCCACATCCCAGGGCAAGAGCTCTGGGGAGGGTTCAGCTGCAGATACAGCAGCAACAACAGCTACACCTACATCCCAGGTTCCTCCCACAATGGCCTCGCCTGCTTCAGTCCCAGAATCTGCAACGCCTCTATTTTTTCTGTTCTTTTGCCCTCTATTTTTTCAGTTTCAAGCCTTGCGGGCCATGGTCCAAGCAAATCCCCAGGTTTTGCAGCCCATGCTTCAAGAGCTTGGAAAACAAAATCCTAATCTGGTCAGACTTATTCAAGAACATCAACCTGACTTTCTTCGGCTGATTAATGAACCTTTAGAAGGTGATGAAGGGGACATACTTGGGCATCTTGCTGATGCAATGCCTCAGTCTATAGAAGTTACACCGGAGGAGCATGAAGCCATAGAACGGCTTGAAGCTATGGGGTTTGACCGAGCAACTGTGTTGGAGGTTTACTTTGCCTGCAATAAAAATGAGGAGCTCGCAGCAAACTACCTTCTAGACCATATGAATGACTTTGAAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_187009.p1 GENE.S_Transcript_187009~~S_Transcript_187009.p1 ORF type:5prime_partial len:267 (+),score=71.61,XPC-binding|PF09280.7|2.8e-18,ubiquitin|PF00240.19|3.7e-18,UBA|PF00627.27|3.6e+03,UBA|PF00627.27|1e-13,Rad60-SLD|PF11976.4|7.1e-07 S_Transcript_187009:1-801(+)
KMKIFVKTLKGSHFNIEVNPQDTVADVKKNIETVQGANVYPASQQMLIHQGKVLKDDTTLEENKVAENSFIVIMLTKIKGSSAEGSKPAAAVASPTSQGKSSGEGSAADTAATTATPTSQVPPTMASPASVPESATPLFFLFFCPLFFQFQALRAMVQANPQVLQPMLQELGKQNPNLVRLIQEHQPDFLRLINEPLEGDEGDILGHLADAMPQSIEVTPEEHEAIERLEAMGFDRATVLEVYFACNKNEELAANYLLDHMNDFED*

Click here to download the sequence:
Link to NCBI Protein BLAST