Transcript Information: S_Transcript_187082.p1


Annotated TAIR IDAT3G54000.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022260 (InterPro:IPR016802); Has 94 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19996757-19998197 | Forward length=352
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5161456641518
Replicate 26.0171244247768
Replicate 36.259352852616
Condition 2: 8 Hour
Replicate 13.4896093246218
Replicate 22.9829131519636
Replicate 32.7129260588158
Condition 3: 24 Hour
Replicate 16.0900887307111
Replicate 24.2580494476774
Replicate 33.210078378833


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_187082.p1 GENE.S_Transcript_187082~~S_Transcript_187082.p1 ORF type:5prime_partial len:165 (-),score=29.42 S_Transcript_187082:57-551(-)
GGTGCCACGTGGGATTTGCTCTACAAAGCGGCTGGTGAAGTTGCTAGAATTAAGCTGAAGAATGAAACTACTACAACGAAAACTAGCACTGGAACTGGCTTCTTTGATTGTAGTAACAAAGGACTATTATGCCCTCCATCTCTTCCCAGAACTACAACACCTGCTCCTCCCATTTTCTCTCTTCCCCAATTCCCCCCTCTTTCTCATTTGCAGCAAATGAGGATGAGGCAAGTGCCGACAAATGGGCATCAGCAATTCAGCAGATTAACCAGATCCAACAGTAAGAACAACAACCACAACCGTCCATTGGGCCTGCCGCCATCTGCTTGGCCACCACTCCAGGCCCAAAACCAGCCCATGCCACCCATGTTCACGGCCCAGTCTGGGCCCAAAAGGGAGTCTGTCGGTACCGGTGTTTTCTTGCCTAGGCGTGTCACCACCACTACCACCCCTGAACCCCGCAAGAAGTCTGGTAATTCTTTTTTTCATTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_187082.p1 GENE.S_Transcript_187082~~S_Transcript_187082.p1 ORF type:5prime_partial len:165 (-),score=29.42 S_Transcript_187082:57-551(-)
GATWDLLYKAAGEVARIKLKNETTTTKTSTGTGFFDCSNKGLLCPPSLPRTTTPAPPIFSLPQFPPLSHLQQMRMRQVPTNGHQQFSRLTRSNSKNNNHNRPLGLPPSAWPPLQAQNQPMPPMFTAQSGPKRESVGTGVFLPRRVTTTTTPEPRKKSGNSFFHF*

Click here to download the sequence:
Link to NCBI Protein BLAST