Transcript Information: S_Transcript_187087.p1


Annotated TAIR IDAT3G55690.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39870.1); Has 76 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 3; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20667035-20668204 | Forward length=293
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.924733961857
Replicate 222.823575404326
Replicate 325.756234875373
Condition 2: 8 Hour
Replicate 115.99404273785
Replicate 213.693114253626
Replicate 310.106651881672
Condition 3: 24 Hour
Replicate 115.442072812317
Replicate 210.355017358159
Replicate 313.045885037129


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_187087.p1 GENE.S_Transcript_187087~~S_Transcript_187087.p1 ORF type:complete len:116 (-),score=22.44 S_Transcript_187087:292-639(-)
ATGAGGATGAGGCAAGTGCCGACAAATGGGCAGCAGCAATTCAACCACCACCACAACCGTCCACTGGGCCTGCCGCCATCTGCTTGGCCACCACTCCAGGCCCAAAACCAGCCCATGCCACCCATGTTCACGGCCCAGTCTGGGCCCAAAAGGGAGTCTGTCGGTACCGGTGTTTTCTTGCCTAGGCGTGTCACCACCACTACCACCCCTGAACCCCGCAAGAAGTCTGAAGGGAACCCATCAAAGAGAAGTGGAAAAGGTTCACAAACACAACACCGACGAAACAGTTCAAAACCACCGACAGTGAACCAAGATGAGATCCAGCTCCCTCAGGAATGGACCTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_187087.p1 GENE.S_Transcript_187087~~S_Transcript_187087.p1 ORF type:complete len:116 (-),score=22.44 S_Transcript_187087:292-639(-)
MRMRQVPTNGQQQFNHHHNRPLGLPPSAWPPLQAQNQPMPPMFTAQSGPKRESVGTGVFLPRRVTTTTTPEPRKKSEGNPSKRSGKGSQTQHRRNSSKPPTVNQDEIQLPQEWTY*

Click here to download the sequence:
Link to NCBI Protein BLAST