Transcript Information: S_Transcript_187162.p1


Annotated TAIR IDAT5G14650.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4724509-4726328 | Forward length=435
E-Value4.4E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.55251905678575
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.073790277913955
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.26182053015691


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_187162.p1 GENE.S_Transcript_187162~~S_Transcript_187162.p1 ORF type:complete len:289 (+),score=45.11,Glyco_hydro_28|PF00295.13|1e-08,Pectate_lyase_3|PF12708.3|1.3e-07 S_Transcript_187162:235-1101(+)
ATGAAGGCATCTCACGTAAGAAGTTTCACATTAATGCTTCTCACTGTTGTACTTCTTTGGTCTACAAGTTTTGATACGTGCATTGCTAGAAGAGGAAGGCATTGGAGGCACAACAGACCTCTCTCAGCCTCACAACTTAAGAAGAAAGGAAACAATAAGCACCATAGTAGTAAACCCAAGACAAAGGGTTCATACCACAAAGCTCCAGGTCATGCACCAGTTGCATCACCCCCACCAACGAAGAAAGCTCCTTATCCTAAAGGGTCGTCTCCTAAAACCAAGCCGCCTTCCAGTCCGGCACCAATTGAAGAAATTCCAACACCTGAACCACAAGGTAGCAGTGTTTTCAGTGTGATTGATTATGGAGCTAAGGGTGATGGAAGATCAGATGATACTAAGGCATTCCAAGATGCATGGGCAGCAGCTTGTAAAGTGGAGTCATCAACGATGCTAATTCCATCAGGATATCAATTTCTTGTGGGACCAATTTCATTTTCTGGTCCTTACTGCCAGAAAAACATTGTATTCCAGCTTGATGGGACGATCATCGCTCCAACAAGCCCCAATACATGGGGTCATGGTCTATTGTGGTGGCTAGATTTCACAAAATTGGTAGGGACCACAATACAAGGAAAGGGAGTCATTGATGGAAGTGGCTCGGTCTGGTGGCAAGCTGATCCGTATGGGGCTCCTGTGGATGATGAAACACAAATGATTGTCCCATTAAATGGCAGAGTGCTAAGACGCCCCCCAATACCAGAAACAAGTGAGCTGAGTGTGAAAATGCCAAGTATCAAGCCAACGGTGATGACCAAATTATTATCTATTTGTAATCTTGTCATCCTGGTATCATCTAAGTGTCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_187162.p1 GENE.S_Transcript_187162~~S_Transcript_187162.p1 ORF type:complete len:289 (+),score=45.11,Glyco_hydro_28|PF00295.13|1e-08,Pectate_lyase_3|PF12708.3|1.3e-07 S_Transcript_187162:235-1101(+)
MKASHVRSFTLMLLTVVLLWSTSFDTCIARRGRHWRHNRPLSASQLKKKGNNKHHSSKPKTKGSYHKAPGHAPVASPPPTKKAPYPKGSSPKTKPPSSPAPIEEIPTPEPQGSSVFSVIDYGAKGDGRSDDTKAFQDAWAAACKVESSTMLIPSGYQFLVGPISFSGPYCQKNIVFQLDGTIIAPTSPNTWGHGLLWWLDFTKLVGTTIQGKGVIDGSGSVWWQADPYGAPVDDETQMIVPLNGRVLRRPPIPETSELSVKMPSIKPTVMTKLLSICNLVILVSSKCL*

Click here to download the sequence:
Link to NCBI Protein BLAST