Transcript Information: S_Transcript_187162.p3


Annotated TAIR IDAT1G60590.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22314426-22316867 | Reverse length=540
E-Value1.7E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.45106781754543
Replicate 20
Replicate 30.15629437358984
Condition 2: 8 Hour
Replicate 10.54217094026609
Replicate 20
Replicate 30.5419283289402
Condition 3: 24 Hour
Replicate 10
Replicate 20.38413239959911
Replicate 30.42749227805281


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_187162.p3 GENE.S_Transcript_187162~~S_Transcript_187162.p3 ORF type:complete len:118 (+),score=8.57,Glyco_hydro_28|PF00295.13|3.9e-33 S_Transcript_187162:1236-1589(+)
ATGAGTGTTTCATCACCCAGCAACAGTCCCAATACTGATGGAATCCACCTACAGAACTCCAAAGATGTGCTAATTCACACTACAAATCTTGCTTGTGGTGATGACTGTATTTCCATACAAACTGGATGCTCAAACGTATACATCCACGGCGTGAATTGTGGACCTGGACATGGCATCAGTATTGGAAGTCTTGGAAAGGATAACACTAAGGCATGTGTCTCAAATGTCACTGTTCGAGACGTCAATATACAGGGAACAATGACTGGAGTCCGCATAAAGACATGGCAGGTAAATAACATTTCAGTTTCACATGCTATAGTTATACAGATCAGACAGACAACAACCATTAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_187162.p3 GENE.S_Transcript_187162~~S_Transcript_187162.p3 ORF type:complete len:118 (+),score=8.57,Glyco_hydro_28|PF00295.13|3.9e-33 S_Transcript_187162:1236-1589(+)
MSVSSPSNSPNTDGIHLQNSKDVLIHTTNLACGDDCISIQTGCSNVYIHGVNCGPGHGISIGSLGKDNTKACVSNVTVRDVNIQGTMTGVRIKTWQVNNISVSHAIVIQIRQTTTIR*

Click here to download the sequence:
Link to NCBI Protein BLAST