Transcript Information: S_Transcript_187374.p1


Annotated TAIR IDAT1G33350.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:12090071-12091687 | Reverse length=538
E-Value6E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.92640194173097
Replicate 20.34909477147967
Replicate 30.87544633308231
Condition 2: 8 Hour
Replicate 11.0122811859399
Replicate 21.911518712888
Replicate 32.2260220600139
Condition 3: 24 Hour
Replicate 10.48390564694354
Replicate 20.28688369083984
Replicate 30.23944978865617


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_187374.p1 GENE.S_Transcript_187374~~S_Transcript_187374.p1 ORF type:5prime_partial len:316 (+),score=53.75,PPR_2|PF13041.2|7.3e-07,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|5.5e-06,PPR_2|PF13041.2|0.00023,PPR_2|PF13041.2|41,PPR|PF01535.16|0.00037,PPR|PF01535.16|6.2,PPR|PF01535.16|6e-07,PPR|PF01535.16|0.00017,PPR|PF01535.16|2.4e+02,PPR|PF01535.16|1.9,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|3.6,PPR_1|PF12854.3|3.3e-06,PPR_1|PF12854.3|0.05,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|4.2,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.0057,PPR_3|PF13812.2|0.093,PPR_3|PF13812.2|0.007,PPR_3|PF13812.2|21,PPR_3|PF13812.2|86,PPR_3|PF13812.2|2.6e+02 S_Transcript_187374:1-948(+)
AGAACATGCAATGCAAGAGAAGTGAACATGGTAACACTCTCTCAAATCCTGAACCAAACCCAATCAATAGAACTCATACTTGACAAATGCAAAACCCTCAACCATCTCAAACAGCTTCAAGCCTCTCTCTTCACTCATGGCCAATCCCAACTCCCTTACTTTGCTTTCAGACTTATTCGCTTTTGTACCCTTCATCTCTCCAACCTCCAATACGCTCATTCCATCTTCAACCATTCAAACTCACCAAATGTCTATCTCTACAGTGCCATGATCAACGCTTATGCTTCACAAAACGACCATGATCAAGTTCTTATCTTGTACAAGGACATGCTTCATAAAGGCAGGCCACGTCCTAACCATTTCATCTATCCTCAAGTGTTAAAATCATTTTCAGAGAGATTAGGTTGTTATGGGACGAAACTGGTCCATCCCCAGATTCTTAAAACGGGTTTTGGATCAAACCCGATTGTGCAAACTGCTCTGGTGGATTCATATGTGAAGTTTTGTGCTGATGTTGATAGTGCACGCCATCTGTTCGACGAAATGTCTGAGAGAAATGTTGTTTCTTGGACGGCTATGGTTTCTGGGTATGCAAGGTCAGGGGAGATGGGTAATGCAATTTTGCTTTTTGAGCAAATGCCCGAGAGAGATGTTCCCTCTTGGAATTCCATCATTGCTGGTTGTACTCAGAATGGGTTGTTCTTAGAAGCAATTTTTTTCCTTAGGAGAATGTTAATGTTAGCCTTGGATGAGGTGCAGGTTAGTCCAAATCACGTTACATTTGCTTGTGCTCTCTCTGCTTGTGGTCACACAGGTATGCTTCAGCTTGGGAAGGAAATTCATGGTTATAGTTATAGAAAGGGACTTGTTCCTGATTCACATATCTCAAATGCTTTGGTTGATTTGTATGGGAAATGTGGTTCCTTAAAGGAGGCTAGACACTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_187374.p1 GENE.S_Transcript_187374~~S_Transcript_187374.p1 ORF type:5prime_partial len:316 (+),score=53.75,PPR_2|PF13041.2|7.3e-07,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|5.5e-06,PPR_2|PF13041.2|0.00023,PPR_2|PF13041.2|41,PPR|PF01535.16|0.00037,PPR|PF01535.16|6.2,PPR|PF01535.16|6e-07,PPR|PF01535.16|0.00017,PPR|PF01535.16|2.4e+02,PPR|PF01535.16|1.9,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|3.6,PPR_1|PF12854.3|3.3e-06,PPR_1|PF12854.3|0.05,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|4.2,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.0057,PPR_3|PF13812.2|0.093,PPR_3|PF13812.2|0.007,PPR_3|PF13812.2|21,PPR_3|PF13812.2|86,PPR_3|PF13812.2|2.6e+02 S_Transcript_187374:1-948(+)
RTCNAREVNMVTLSQILNQTQSIELILDKCKTLNHLKQLQASLFTHGQSQLPYFAFRLIRFCTLHLSNLQYAHSIFNHSNSPNVYLYSAMINAYASQNDHDQVLILYKDMLHKGRPRPNHFIYPQVLKSFSERLGCYGTKLVHPQILKTGFGSNPIVQTALVDSYVKFCADVDSARHLFDEMSERNVVSWTAMVSGYARSGEMGNAILLFEQMPERDVPSWNSIIAGCTQNGLFLEAIFFLRRMLMLALDEVQVSPNHVTFACALSACGHTGMLQLGKEIHGYSYRKGLVPDSHISNALVDLYGKCGSLKEARHF*

Click here to download the sequence:
Link to NCBI Protein BLAST