Transcript Information: S_Transcript_187374.p2


Annotated TAIR IDAT1G33350.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:12090071-12091687 | Reverse length=538
E-Value2.3E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23551328526708
Replicate 20.19524592528774
Replicate 30.97926032302304
Condition 2: 8 Hour
Replicate 12.0759229512253
Replicate 22.6727429790824
Replicate 32.546583563427
Condition 3: 24 Hour
Replicate 10.28997632952116
Replicate 20.50141176053866
Replicate 30.66961179836591


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_187374.p2 GENE.S_Transcript_187374~~S_Transcript_187374.p2 ORF type:complete len:226 (+),score=36.92,PPR|PF01535.16|0.00051,PPR|PF01535.16|3.2,PPR|PF01535.16|0.3,PPR|PF01535.16|6.9,PPR|PF01535.16|5.1,PPR_3|PF13812.2|0.098,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|5.3e+02,PPR_3|PF13812.2|1.6e+03,PPR_2|PF13041.2|2.5e-05,PPR_2|PF13041.2|1.5,PPR_2|PF13041.2|7.9,PPR_2|PF13041.2|6.3e+03 S_Transcript_187374:986-1663(+)
ATGATCAATTGTTATGCACTTCATGGGCAAAGTAGGAATGCCCTTGATATTTTTGAGGAAATGTTGCAGTACGCTGCTGATGATGTGAAACCTGATGAAATCACCTTTATTGGTCTGTTAAATGCTTGCACACATGGAGGGATGGTTGAAATGGGGTACTATTATTTTGACATAATGACTAAAGTCTACGGCATTGAACCTCAAATTGAGCATTATGGCTGCATAGTAGATCTTCTTGGCCGGGCAGGCCGTTTTCAAGAAGTTATGGATACTATTAATGGAATGAAAGTCGAAACAGATGAAGTTATCTGGGGTTCCCTGCTTAATGGGTGCAGAGTTCATGGCAACGCGAATTTAGCAGAGCTTGCTGTCAGAAAGTTGATCGAGATTGATCCAAATAACGGTGGCTATGTTTCAATGTTGGCCAATTTATACGTGGTATTAGGTAGATGGGATGAGGTACATGGATTGAGGAAGAAGTTGAAGGAGCAGAATGCTCAAAAGGTACCTGGTTGCAGCTGGATTGAGGTTGACTACAGAATTCACCAGTTCCATTCATCTGACTACACTCATCCCAGAATAGAAGAGATATACAGTGTATTGGACAGTATTTTTGATTTTATTAGTCAAGGGTTGCTTAGTCATGTTTGTGATGGGAACGGTAATTTGACATACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_187374.p2 GENE.S_Transcript_187374~~S_Transcript_187374.p2 ORF type:complete len:226 (+),score=36.92,PPR|PF01535.16|0.00051,PPR|PF01535.16|3.2,PPR|PF01535.16|0.3,PPR|PF01535.16|6.9,PPR|PF01535.16|5.1,PPR_3|PF13812.2|0.098,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|5.3e+02,PPR_3|PF13812.2|1.6e+03,PPR_2|PF13041.2|2.5e-05,PPR_2|PF13041.2|1.5,PPR_2|PF13041.2|7.9,PPR_2|PF13041.2|6.3e+03 S_Transcript_187374:986-1663(+)
MINCYALHGQSRNALDIFEEMLQYAADDVKPDEITFIGLLNACTHGGMVEMGYYYFDIMTKVYGIEPQIEHYGCIVDLLGRAGRFQEVMDTINGMKVETDEVIWGSLLNGCRVHGNANLAELAVRKLIEIDPNNGGYVSMLANLYVVLGRWDEVHGLRKKLKEQNAQKVPGCSWIEVDYRIHQFHSSDYTHPRIEEIYSVLDSIFDFISQGLLSHVCDGNGNLTY*

Click here to download the sequence:
Link to NCBI Protein BLAST