Transcript Information: S_Transcript_187493.p1


Annotated TAIR IDAT5G65520.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26189876-26190496 | Reverse length=206
E-Value1E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48831194926937
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.88040602226696
Replicate 20.92360843008046
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_187493.p1 GENE.S_Transcript_187493~~S_Transcript_187493.p1 ORF type:complete len:218 (-),score=21.03,TPR_11|PF13414.2|0.82,TPR_11|PF13414.2|1.8e-09,TPR_8|PF13181.2|1.7e+02,TPR_8|PF13181.2|1.5e-08,TPR_2|PF07719.13|2.1e+03,TPR_2|PF07719.13|23,TPR_2|PF07719.13|1.7e+02,TPR_2|PF07719.13|1.1e-06,TPR_1|PF00515.24|1.1e+03,TPR_1|PF00515.24|5.4e+02,TPR_1|PF00515.24|3.1e-08,TPR_17|PF13431.2|1.2e+02,TPR_17|PF13431.2|5.7e+03,TPR_17|PF13431.2|0.057,TPR_17|PF13431.2|2.7,TPR_16|PF13432.2|1.4e+03,TPR_16|PF13432.2|0.066,TPR_16|PF13432.2|0.0012,TPR_19|PF14559.2|0.62,TPR_19|PF14559.2|4.8e+03,TPR_19|PF14559.2|0.00067 S_Transcript_187493:197-850(-)
ATGAATCGACAGCATCACCATCCCCAATACGCCGGAGCAAACCTGATCAATCTAGTCTTAACCCTAGGAATCATTCTAGCCATCTACAATCTCCCAAAGAAAGCCTTCTCGAAGCTCCGATCGAGCAATCGGGCTGCAGCCCAATCCAATCGGCACTTCCTCTTGGGGGCCCAGATCTTGGCCCGAGCCCGATCAATGCGTAACCGCTCCACCGCCGTAGCTTTAGCCAAAGACGCTCTAGCTGAGGCTGACAACGCGTTTGCCCTGCAACCAAGAGATCCGGAGGCCCACATCCTTAGGGCCCTAGCTCAAGACCTATTGGGCCACCGAACCTCCGCCTTGAGGTCCCTCGATGTCGCCCTATCGCCACCAGCTGTGAAGTCATTGTCGGAGAGAGAGAAAGGGGATGCGCTAGTGAAGAGGGCGGAACTTCAGTTGGCTGTGAATCGGAGACGGAGACTTGAGTCGGCCGTGTCGGACCTGGTTAAAGCGGTTGAGTTGACTCAGGATAATGCTAAGGCGTTCTGTTTGTTGGGCCAGTGTTATGAGCAGAAAGGCTCGAGAGATGAGGCCTACAGTGCCTTTCAGAAGGCCCTCGAAATTGAGCCTGATTCTTCTTTGGCCCGCCAAGGTTTGGACCGCTTGAGCTCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_187493.p1 GENE.S_Transcript_187493~~S_Transcript_187493.p1 ORF type:complete len:218 (-),score=21.03,TPR_11|PF13414.2|0.82,TPR_11|PF13414.2|1.8e-09,TPR_8|PF13181.2|1.7e+02,TPR_8|PF13181.2|1.5e-08,TPR_2|PF07719.13|2.1e+03,TPR_2|PF07719.13|23,TPR_2|PF07719.13|1.7e+02,TPR_2|PF07719.13|1.1e-06,TPR_1|PF00515.24|1.1e+03,TPR_1|PF00515.24|5.4e+02,TPR_1|PF00515.24|3.1e-08,TPR_17|PF13431.2|1.2e+02,TPR_17|PF13431.2|5.7e+03,TPR_17|PF13431.2|0.057,TPR_17|PF13431.2|2.7,TPR_16|PF13432.2|1.4e+03,TPR_16|PF13432.2|0.066,TPR_16|PF13432.2|0.0012,TPR_19|PF14559.2|0.62,TPR_19|PF14559.2|4.8e+03,TPR_19|PF14559.2|0.00067 S_Transcript_187493:197-850(-)
MNRQHHHPQYAGANLINLVLTLGIILAIYNLPKKAFSKLRSSNRAAAQSNRHFLLGAQILARARSMRNRSTAVALAKDALAEADNAFALQPRDPEAHILRALAQDLLGHRTSALRSLDVALSPPAVKSLSEREKGDALVKRAELQLAVNRRRRLESAVSDLVKAVELTQDNAKAFCLLGQCYEQKGSRDEAYSAFQKALEIEPDSSLARQGLDRLSS*

Click here to download the sequence:
Link to NCBI Protein BLAST