Transcript Information: S_Transcript_187494.p1


Annotated TAIR IDAT5G65520.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26189876-26190496 | Reverse length=206
E-Value3.1E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3423507616552
Replicate 26.3920231428314
Replicate 34.0505074576132
Condition 2: 8 Hour
Replicate 17.2745490334145
Replicate 25.3316087879722
Replicate 37.7693276317222
Condition 3: 24 Hour
Replicate 16.3288914785834
Replicate 26.2484340327313
Replicate 34.2429607410476


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_187494.p1 GENE.S_Transcript_187494~~S_Transcript_187494.p1 ORF type:complete len:214 (-),score=25.19,TPR_11|PF13414.2|0.82,TPR_11|PF13414.2|1.8e-09,TPR_8|PF13181.2|1.6e+02,TPR_8|PF13181.2|1.5e-08,TPR_2|PF07719.13|2e+03,TPR_2|PF07719.13|22,TPR_2|PF07719.13|1.7e+02,TPR_2|PF07719.13|1e-06,TPR_1|PF00515.24|1.1e+03,TPR_1|PF00515.24|5.2e+02,TPR_1|PF00515.24|3e-08,TPR_17|PF13431.2|1.1e+02,TPR_17|PF13431.2|5.6e+03,TPR_17|PF13431.2|0.056,TPR_17|PF13431.2|2.6,TPR_16|PF13432.2|1.5e+03,TPR_16|PF13432.2|0.061,TPR_16|PF13432.2|0.0012,TPR_19|PF14559.2|0.6,TPR_19|PF14559.2|4.7e+03,TPR_19|PF14559.2|0.00064 S_Transcript_187494:197-838(-)
ATGCAATTGCAAAAGGAAACAGCAGTTCAGTTAGCATACCTAGTCTTAACCCTAGGAATCTTTCTAGCCATCTACAATCTCCCAAAGAAAGCCTTCTCGAAGCTCCGATCGAGCAATCGGGCTGCAGCCCAATCCAATCGGCACTTCCTCTTGGGGGCCCAGATCTTGGCCCGAGCCCGATCAATGCGTAACCGCTCCACCGCCGTAGCTTTAGCCAAAGACGCTCTAGCTGAGGCTGACAACGCGTTTGCCCTGCAACCAAGAGATCCGGAGGCCCACATCCTTAGGGCCCTAGCTCAAGACCTATTGGGCCACCGAACCTCCGCCTTGAGGTCCCTCGATGTCGCCCTATCGCCACCAGCTGTGAAGTCATTGTCGGAGAGAGAGAAAGGGGATGCGCTAGTGAAGAGGGCGGAACTTCAGTTGGCTGTGAATCGGAGACGGAGACTTGAGTCGGCCGTGTCGGACCTGGTTAAAGCGGTTGAGTTGACTCAGGATAATGCTAAGGCGTTCTGTTTGTTGGGCCAGTGTTATGAGCAGAAAGGCTCGAGAGATGAGGCCTACAGTGCCTTTCAGAAGGCCCTCGAAATTGAGCCTGATTCTTCTTTGGCCCGCCAAGGTTTGGACCGCTTGAGCTCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_187494.p1 GENE.S_Transcript_187494~~S_Transcript_187494.p1 ORF type:complete len:214 (-),score=25.19,TPR_11|PF13414.2|0.82,TPR_11|PF13414.2|1.8e-09,TPR_8|PF13181.2|1.6e+02,TPR_8|PF13181.2|1.5e-08,TPR_2|PF07719.13|2e+03,TPR_2|PF07719.13|22,TPR_2|PF07719.13|1.7e+02,TPR_2|PF07719.13|1e-06,TPR_1|PF00515.24|1.1e+03,TPR_1|PF00515.24|5.2e+02,TPR_1|PF00515.24|3e-08,TPR_17|PF13431.2|1.1e+02,TPR_17|PF13431.2|5.6e+03,TPR_17|PF13431.2|0.056,TPR_17|PF13431.2|2.6,TPR_16|PF13432.2|1.5e+03,TPR_16|PF13432.2|0.061,TPR_16|PF13432.2|0.0012,TPR_19|PF14559.2|0.6,TPR_19|PF14559.2|4.7e+03,TPR_19|PF14559.2|0.00064 S_Transcript_187494:197-838(-)
MQLQKETAVQLAYLVLTLGIFLAIYNLPKKAFSKLRSSNRAAAQSNRHFLLGAQILARARSMRNRSTAVALAKDALAEADNAFALQPRDPEAHILRALAQDLLGHRTSALRSLDVALSPPAVKSLSEREKGDALVKRAELQLAVNRRRRLESAVSDLVKAVELTQDNAKAFCLLGQCYEQKGSRDEAYSAFQKALEIEPDSSLARQGLDRLSS*

Click here to download the sequence:
Link to NCBI Protein BLAST