Transcript Information: S_Transcript_187682.p1


Annotated TAIR IDAT3G48150.1
Annotated Gene Nameanaphase-promoting complex subunit 8
Annotated Gene Symbol(s)APC8, CDC23
Annotation TypeOrtholog
Chromosome Positionchr3:17779800-17782565 | Reverse length=579
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.777238096185
Replicate 21.7378224651467
Replicate 31.6421614321014
Condition 2: 8 Hour
Replicate 12.8847702655026
Replicate 23.1795606799611
Replicate 33.2849765144663
Condition 3: 24 Hour
Replicate 11.7206586311084
Replicate 21.5523158613937
Replicate 31.4252182626179


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_187682.p1 GENE.S_Transcript_187682~~S_Transcript_187682.p1 ORF type:complete len:584 (+),score=97.81,ANAPC8|PF04049.9|2.5e-43,ANAPC8|PF04049.9|4.2e+02,TPR_1|PF00515.24|1.2e+02,TPR_1|PF00515.24|9.4e+03,TPR_1|PF00515.24|1.4e-05,TPR_1|PF00515.24|0.00098,TPR_1|PF00515.24|0.00083,TPR_1|PF00515.24|0.16,TPR_1|PF00515.24|1.5,TPR_1|PF00515.24|0.99,TPR_8|PF13181.2|8e+02,TPR_8|PF13181.2|1.2e+02,TPR_8|PF13181.2|1.3e-05,TPR_8|PF13181.2|0.015,TPR_8|PF13181.2|3.3,TPR_8|PF13181.2|0.26,TPR_8|PF13181.2|0.86,TPR_8|PF13181.2|0.98,TPR_11|PF13414.2|1.7e+02,TPR_11|PF13414.2|5.8e+02,TPR_11|PF13414.2|1.9e+03,TPR_11|PF13414.2|3.1e+03,TPR_11|PF13414.2|0.003,TPR_11|PF13414.2|3.8e-06,TPR_11|PF13414.2|0.00017,TPR_11|PF13414.2|0.0024,TPR_11|PF13414.2|0.015,TPR_2|PF07719.13|46,TPR_2|PF07719.13|1.3e+04,TPR_2|PF07719.13|3e+02,TPR_2|PF07719.13|8.8e+03,TPR_2|PF07719.13|3.6e+02,TPR_2|PF07719.13|0.0083,TPR_2|PF07719.13|1.1,TPR_2|PF07719.13|0.15,TPR_2|PF07719.13|1.1,TPR_2|PF07719.13|0.073,TPR_2|PF07719.13|0.026,TPR_14|PF13428.2|1.1e+03,TPR_14|PF13428.2|63,TPR_14|PF13428.2|4.6e+02,TPR_14|PF13428.2|0.0042,TPR_14|PF13428.2|0.012,TPR_14|PF13428.2|5.3,TPR_14|PF13428.2|3.4,TPR_14|PF13428.2|2.7e+02,TPR_14|PF13428.2|0.35,TPR_12|PF13424.2|1.1e+04,TPR_12|PF13424.2|1.8e+03,TPR_12|PF13424.2|8.8e+02,TPR_12|PF13424.2|1.6e+03,TPR_12|PF13424.2|3.1e-06,TPR_12|PF13424.2|0.15,TPR_12|PF13424.2|0.00066,TPR_12|PF13424.2|0.014,ANAPC3|PF12895.3|0.00024,ANAPC3|PF12895.3|1.4e+03,ANAPC3|PF12895.3|0.007,ANAPC3|PF12895.3|0.25,ANAPC3|PF12895.3|2.6,TPR_7|PF13176.2|1.9e+02,TPR_7|PF13176.2|6.5e+02,TPR_7|PF13176.2|1.1e+02,TPR_7|PF13176.2|0.14,TPR_7|PF13176.2|2e+03,TPR_7|PF13176.2|1.4,TPR_7|PF13176.2|0.1,TPR_7|PF13176.2|0.096,TPR_19|PF14559.2|2.2e+03,TPR_19|PF14559.2|31,TPR_19|PF14559.2|7.4e+02,TPR_19|PF14559.2|0.32,TPR_19|PF14559.2|0.99,TPR_19|PF14559.2|64,TPR_19|PF14559.2|0.025,TPR_16|PF13432.2|4.6e+02,TPR_16|PF13432.2|4.1e+02,TPR_16|PF13432.2|1e+03,TPR_16|PF13432.2|0.00023,TPR_16|PF13432.2|18,TPR_16|PF13432.2|0.0074,TPR_17|PF13431.2|3.2e+03,TPR_17|PF13431.2|7e+03,TPR_17|PF13431.2|1.2e+04,TPR_17|PF13431.2|2.8e+03,TPR_17|PF13431.2|25,TPR_17|PF13431.2|0.034,TPR_17|PF13431.2|0.18,TPR_17|PF13431.2|4.4,TPR_17|PF13431.2|2.9e+02 S_Transcript_187682:168-1919(+)
ATGGATTCCAAAGAGACTTGTAGAAACGAGCTTCGAGTCGCTGTTCGTCAACTCAGCAATCGTGGTCTCTACACTGCTTCCAAATGGGCAGCAGAGCAGTTGTTAGGAATTGAGCAAGACCCAGCAAAGCTTACGCCTTCTCATACTCGGTTCCAGAGAGGTAGCTCAAGCATTCGTCGTAGATTTAGAACCAATGATCCCACTTCAACGCCTAGTCCTAGTGTTTCTTATGTCTCTACACCAGTGCCAGAGGAGGATGATGACACTATTGACACTGACTTCTATCTTCTGGCTAAGTCTTACTTTGATTGTAAGGAGTATAGGAGGGCTGCTCATGTTCTACGGGACCAAACTGGACGGAAAGCCGTGTTCTTGCGATGCTATGCCTTGTATTTGGCTGGAGAGAAACGGAAGGAAGAAGAAATAATAGAACTTGAGGGGCCCTTGGGCAAAAGCAACATTGTGAATGGTGAATTGGCTTCCCTTGAAAGGGAGTTGTCCACATTGCGGAAACGGGGTGGTCTTGATTCATTTGGTCTGTATTTGTATGGTCTAGTGCTGAAAGAGATGGGAAATGAGAATCTCGCTTGTGCTCTCCTCGTTGAGTCTGTAAATAGCTATCCATGGAATTGGAGTGCTTGGTTGGCTCTACGGTCACTGTGCACCACAATTGACATTTTGAACAGCCTTAATCTCAATAACCATTGGATGAAAGACTTTTTCTTCGCTAGTGCTTATGAAGAGCTCAGATTGCACAAGGAATCCATGGAAAAATATGAACATCTCCGGAAAACTTTTTCTTTCAGCAGCTACTTACAGGCTCGGATGGCAAGTGTGCAGTACAATTTAAGAGAGTTTAACCAGGTTGAAATTATCTTTGAGGAGCTCTTGCGAAATGACCCTTACCGAATTGAGGACATGGATATGTACTCCAACGTGCTCTATGCAAAGGAAGCGTTTTCTGCCCTTAGCTATCTAGCCCACAGGGTATTCTTGACTGACAAATATAGGCCTGAATCATGCTGCATAATCGGTAATTATTATAGTTCAAAAGGACAGCATGAGAAATCAATTATGTATTTCAGGAGGGCTCTTAAGTTGGACAAAAACTATTTAACTGCCTGGACACTGATGGGTCACGAGTTTGTGGAGATGAAGAACACACCAGCCGCTGTGGATGCCTACCGAAGAGCTGTGGACATAAATCCATGTGATTACCGTGCCTGGTACGGATTAGGACAAGCATATGAAATGATGGTCATGCCCCTTTATGCTCTATATTACTTCAGAAAATCAGTATCCCTTCAACCAAATGATGCTCGGCTGTGGATTGCTATGGCCCACTGTTACGAGAGTGACCAGCTTCATATGTTTGAGGAGGCAATCAAGTGTTATAAACGAGCAGCAAATTGCCAAGACACTGAGGCAATTGCAGTTAATAGGCTGGCAAAACTGCATGATCAGCTTGGGCATCATGCAGAGGCTGCGTTTTACTACAAGAAGGATCTGGAGAGAATGGAAGTTGAAGAAAGAGAAGGGCCAAACATGGTTGATGCTCTGATGTTTCTTGCAAGATATTATAGAGCACAGGAGAGATTTGAAGAAGCGGAGATATACTGTACCCGATTGCTCGATTATAATGGGCCTGAAAAAGAAACAGCGAAGAGTTTACTCAGAGCCATGAAAATGGCGCAATCTGGTTTTCCTTCACTCGATGTCGACCACTTTCCACCCTTTGGTTCTCACTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_187682.p1 GENE.S_Transcript_187682~~S_Transcript_187682.p1 ORF type:complete len:584 (+),score=97.81,ANAPC8|PF04049.9|2.5e-43,ANAPC8|PF04049.9|4.2e+02,TPR_1|PF00515.24|1.2e+02,TPR_1|PF00515.24|9.4e+03,TPR_1|PF00515.24|1.4e-05,TPR_1|PF00515.24|0.00098,TPR_1|PF00515.24|0.00083,TPR_1|PF00515.24|0.16,TPR_1|PF00515.24|1.5,TPR_1|PF00515.24|0.99,TPR_8|PF13181.2|8e+02,TPR_8|PF13181.2|1.2e+02,TPR_8|PF13181.2|1.3e-05,TPR_8|PF13181.2|0.015,TPR_8|PF13181.2|3.3,TPR_8|PF13181.2|0.26,TPR_8|PF13181.2|0.86,TPR_8|PF13181.2|0.98,TPR_11|PF13414.2|1.7e+02,TPR_11|PF13414.2|5.8e+02,TPR_11|PF13414.2|1.9e+03,TPR_11|PF13414.2|3.1e+03,TPR_11|PF13414.2|0.003,TPR_11|PF13414.2|3.8e-06,TPR_11|PF13414.2|0.00017,TPR_11|PF13414.2|0.0024,TPR_11|PF13414.2|0.015,TPR_2|PF07719.13|46,TPR_2|PF07719.13|1.3e+04,TPR_2|PF07719.13|3e+02,TPR_2|PF07719.13|8.8e+03,TPR_2|PF07719.13|3.6e+02,TPR_2|PF07719.13|0.0083,TPR_2|PF07719.13|1.1,TPR_2|PF07719.13|0.15,TPR_2|PF07719.13|1.1,TPR_2|PF07719.13|0.073,TPR_2|PF07719.13|0.026,TPR_14|PF13428.2|1.1e+03,TPR_14|PF13428.2|63,TPR_14|PF13428.2|4.6e+02,TPR_14|PF13428.2|0.0042,TPR_14|PF13428.2|0.012,TPR_14|PF13428.2|5.3,TPR_14|PF13428.2|3.4,TPR_14|PF13428.2|2.7e+02,TPR_14|PF13428.2|0.35,TPR_12|PF13424.2|1.1e+04,TPR_12|PF13424.2|1.8e+03,TPR_12|PF13424.2|8.8e+02,TPR_12|PF13424.2|1.6e+03,TPR_12|PF13424.2|3.1e-06,TPR_12|PF13424.2|0.15,TPR_12|PF13424.2|0.00066,TPR_12|PF13424.2|0.014,ANAPC3|PF12895.3|0.00024,ANAPC3|PF12895.3|1.4e+03,ANAPC3|PF12895.3|0.007,ANAPC3|PF12895.3|0.25,ANAPC3|PF12895.3|2.6,TPR_7|PF13176.2|1.9e+02,TPR_7|PF13176.2|6.5e+02,TPR_7|PF13176.2|1.1e+02,TPR_7|PF13176.2|0.14,TPR_7|PF13176.2|2e+03,TPR_7|PF13176.2|1.4,TPR_7|PF13176.2|0.1,TPR_7|PF13176.2|0.096,TPR_19|PF14559.2|2.2e+03,TPR_19|PF14559.2|31,TPR_19|PF14559.2|7.4e+02,TPR_19|PF14559.2|0.32,TPR_19|PF14559.2|0.99,TPR_19|PF14559.2|64,TPR_19|PF14559.2|0.025,TPR_16|PF13432.2|4.6e+02,TPR_16|PF13432.2|4.1e+02,TPR_16|PF13432.2|1e+03,TPR_16|PF13432.2|0.00023,TPR_16|PF13432.2|18,TPR_16|PF13432.2|0.0074,TPR_17|PF13431.2|3.2e+03,TPR_17|PF13431.2|7e+03,TPR_17|PF13431.2|1.2e+04,TPR_17|PF13431.2|2.8e+03,TPR_17|PF13431.2|25,TPR_17|PF13431.2|0.034,TPR_17|PF13431.2|0.18,TPR_17|PF13431.2|4.4,TPR_17|PF13431.2|2.9e+02 S_Transcript_187682:168-1919(+)
MDSKETCRNELRVAVRQLSNRGLYTASKWAAEQLLGIEQDPAKLTPSHTRFQRGSSSIRRRFRTNDPTSTPSPSVSYVSTPVPEEDDDTIDTDFYLLAKSYFDCKEYRRAAHVLRDQTGRKAVFLRCYALYLAGEKRKEEEIIELEGPLGKSNIVNGELASLERELSTLRKRGGLDSFGLYLYGLVLKEMGNENLACALLVESVNSYPWNWSAWLALRSLCTTIDILNSLNLNNHWMKDFFFASAYEELRLHKESMEKYEHLRKTFSFSSYLQARMASVQYNLREFNQVEIIFEELLRNDPYRIEDMDMYSNVLYAKEAFSALSYLAHRVFLTDKYRPESCCIIGNYYSSKGQHEKSIMYFRRALKLDKNYLTAWTLMGHEFVEMKNTPAAVDAYRRAVDINPCDYRAWYGLGQAYEMMVMPLYALYYFRKSVSLQPNDARLWIAMAHCYESDQLHMFEEAIKCYKRAANCQDTEAIAVNRLAKLHDQLGHHAEAAFYYKKDLERMEVEEREGPNMVDALMFLARYYRAQERFEEAEIYCTRLLDYNGPEKETAKSLLRAMKMAQSGFPSLDVDHFPPFGSHS*

Click here to download the sequence:
Link to NCBI Protein BLAST