Transcript Information: S_Transcript_187780.p1


Annotated TAIR IDAT5G60740.1
Annotated Gene NameABC transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24425824-24430269 | Reverse length=1109
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7379630900391
Replicate 23.026445755489
Replicate 33.4406201747184
Condition 2: 8 Hour
Replicate 13.0423053401671
Replicate 22.8847102498413
Replicate 32.982464273948
Condition 3: 24 Hour
Replicate 14.5547630872021
Replicate 24.0726465246934
Replicate 33.6328047497081


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_187780.p1 GENE.S_Transcript_187780~~S_Transcript_187780.p1 ORF type:complete len:729 (+),score=83.11,ABC_tran|PF00005.23|6.8e-22 S_Transcript_187780:1940-4126(+)
ATGTTCGGTCAGCCTAAACCTGGAACTGATGATGCTTTACTCCCACCAATGCCTATGAATGCGTCTACCGCATCGTCATCCTCAGATCCAAAATCAAAGAAAAAAGAACCAAGTAATTTAACAAAAATGATGCAACAAATAGAGGATAATCCGGATAATCCGGATGGTTTCCATGTTGAGGTAGGGGATAAGAACATAAAGAAACAAATGAAGTCTAAGGATTTGCATACTCGTAGCCAAATATTTAAGTACGCTTATGGGCAACTTGAGAAAGAAAAGGCAATGCAACAACAAAACAAGAATTTGACATTTTCTGGGATCATTTCTATGGCCACTGATACAGAAATCAGAAAAAGGCCTTTGTTAGAGGTTGCTTTTAAAGATCTAACACTTACTTTAAAAGGAAAGAACAAACATCTAATGAGATCTATTACTGGAAAACTTATGCCTGGTCGAGTTTCAGCGGTTATGGGACCATCAGGGGCTGGAAAGACTACTTTTCTATCAGCTGTGATGGGAAAGGCAAATGGATGCTATGTTACAGGATCAATTCTTATTAATGGTAAAAATGAGTCTATTCATTCTTATAAAAGGATCATTGGTTTTGTTCCACAAGATGATATCGTGCATGGCAACCTAACCGTGGAAGAAAATTTGAGATTTAGCGCTCGATGCAGATTGCCAGCAGACATTCCAAAGCCAGATAAGGTCCTTGTTGTTGAAAGAGTAATCGAAGCGTTAGGGTTACAAGCAATACGAGATTCACTAGTTGGAACTGTTGAGAAACGAGGAATTTCTGGAGGTCAAAGAAAGCGAGTTAATGTGAGATTAGAGATGGTTATGGAACCTTCACTTTTGATTTTAGATGAACCGACATCTGGATTAGATAGTTCATCCTCTCTCTTACTTCTAAGAGCACTTAGACGCGAAGCTCTTGAAGGCGTCAATATTTGCATGGTTATCCATCAACCAAGCTATGCCTTATTCAAGATGTTCGATGATTTTATACTACTTGCAAAGGGAGGCCTTACTGTGTACCATGGATCAGTGAAGAAAGTGGAGGAGTATTTTGCAGGTATTGGAATCACTGTTCCTGAACGTGTAACTCCACCTGATCATTACATAGATATTTTAGAAGGCATAGTTAAGCCTGGGTCTAATATTACGAGGGAACAACTTCCTGTGAGATGGATGCTACATAATGGATATCCAGTACCTAAAGATATGTTACATCTTTGTGATCAACTTTCTTCTTCTAATCCTCCTAGTGAAGGTTCTTCAAAAGGTGGTGAAAATAAGGCCTCTGAGAGAACCTTTGCTGGTGATCTTTTACAAGACATGCATTTGACTTTTGTGATGAAACGAGATCATCTTATGCATAATTTCTTAAGGAAGCAAGACCTTTCGAATCGAGTTACTCCTGGAGTATTACGCCAATATAGATACTTTCTTGGAAGAGTCGGCAAGCAGAGGCTTCGTGAAGCTAAAATACAAGCTGTTGATTATTTAATTCTATTATTGGCTGGAGCTTGCTTAGGAACTATAGCTAAAGTGAGCGATGAGACTTTCGGTTCACTGGGTTATAATTACACTGTAATTGCGGTTTCACTCCTAAGCAAGATTGCAGCTTTAAGATCATTTACGCTTGATAGATTACAATATTGGAGAGAAAGTGCGTCTGGGATGAGTAGTTTGGCTTATTTTCTATCTAAAGATACAATAGATCATTTCAATACTCTTATTAAGCCTTTGGTTTATCTCTCTATGTTTTATTTCTTCAACAACCCAATATCAAGCTTTGGAGCCAATTACGTTGTCTTGGTAGCATTGGTTTATTGCGTAACCGGGATAGCTTATGCCCTTGCTATCTTTCTTGAGGCTGGCCCAGCACAATTGTGGTGCGTGCTTCTTCCAGTTGTGTTGTCACTCATTGCAAGTCAAGATAAAGAGAGTAAAATAATGTACGAAGTTGGAAAATTTACATATACAAAGTGGGCTTTGGAGGCTTTTGTCATTGCAAACGCTAAAAGATATTATGGAGTATGGCTGATAACTCGTTGTGGCTCTTTGATGCAAAGTGGCTATAGCCTTGATCACTGGAATCGTTGTGTAATCAACCTAATTGTGGCGGGCATATTTAGTCGTATCATAGCATTCTTTTTCATGATAATGTTCCAAAAGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_187780.p1 GENE.S_Transcript_187780~~S_Transcript_187780.p1 ORF type:complete len:729 (+),score=83.11,ABC_tran|PF00005.23|6.8e-22 S_Transcript_187780:1940-4126(+)
MFGQPKPGTDDALLPPMPMNASTASSSSDPKSKKKEPSNLTKMMQQIEDNPDNPDGFHVEVGDKNIKKQMKSKDLHTRSQIFKYAYGQLEKEKAMQQQNKNLTFSGIISMATDTEIRKRPLLEVAFKDLTLTLKGKNKHLMRSITGKLMPGRVSAVMGPSGAGKTTFLSAVMGKANGCYVTGSILINGKNESIHSYKRIIGFVPQDDIVHGNLTVEENLRFSARCRLPADIPKPDKVLVVERVIEALGLQAIRDSLVGTVEKRGISGGQRKRVNVRLEMVMEPSLLILDEPTSGLDSSSSLLLLRALRREALEGVNICMVIHQPSYALFKMFDDFILLAKGGLTVYHGSVKKVEEYFAGIGITVPERVTPPDHYIDILEGIVKPGSNITREQLPVRWMLHNGYPVPKDMLHLCDQLSSSNPPSEGSSKGGENKASERTFAGDLLQDMHLTFVMKRDHLMHNFLRKQDLSNRVTPGVLRQYRYFLGRVGKQRLREAKIQAVDYLILLLAGACLGTIAKVSDETFGSLGYNYTVIAVSLLSKIAALRSFTLDRLQYWRESASGMSSLAYFLSKDTIDHFNTLIKPLVYLSMFYFFNNPISSFGANYVVLVALVYCVTGIAYALAIFLEAGPAQLWCVLLPVVLSLIASQDKESKIMYEVGKFTYTKWALEAFVIANAKRYYGVWLITRCGSLMQSGYSLDHWNRCVINLIVAGIFSRIIAFFFMIMFQKK*

Click here to download the sequence:
Link to NCBI Protein BLAST