Transcript Information: S_Transcript_187787.p1


Annotated TAIR IDAT4G16470.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9287862-9289541 | Reverse length=501
E-Value4.2E-164
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2672857731038
Replicate 21.4008120353978
Replicate 31.4637092129842
Condition 2: 8 Hour
Replicate 12.3694878130148
Replicate 23.0776088075814
Replicate 33.2142944801162
Condition 3: 24 Hour
Replicate 10.98244185010609
Replicate 21.199143469648
Replicate 32.0017495559616


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_187787.p1 GENE.S_Transcript_187787~~S_Transcript_187787.p1 ORF type:5prime_partial len:378 (+),score=58.90,PPR_2|PF13041.2|5.3e+02,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|5.7e+02,PPR_2|PF13041.2|1.7e-13,PPR_2|PF13041.2|0.052,PPR_2|PF13041.2|18,PPR_2|PF13041.2|2.6e+03,PPR_2|PF13041.2|1.8e+03,PPR|PF01535.16|14,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|5.7e-08,PPR|PF01535.16|0.0043,PPR|PF01535.16|1.2,PPR|PF01535.16|3.5e+02,PPR|PF01535.16|6.8e+02,PPR|PF01535.16|9.5e+03,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|5.1e-06,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|12,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|9.1e+02,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|48,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|7.1e-06,PPR_1|PF12854.3|4.8,PPR_1|PF12854.3|0.15 S_Transcript_187787:2-1135(+)
AGAGGAGCATATGAATGGGGCAAGATCATACATGCTCATATGGTGGTGGTTGGTTTTGCTCTGAATGAATATCTGAAAACAAAATTGTTAATTTTATATGCTAAGGCAGGAAATCTAGGAACTGCCTGCATTCTCTTTGATAAATTGCCGCAGAAGAGCTTAATTTCATGGAATGCAATGATTGCAGGGTACGTACAAAAAGGTTGTGAGGATATGGGGTTGAGTCTGTATGACAAGATGAGATGTGGTGGTGTGATCCCAGATCAGTTCACTTTTGCTTCTGTGTTCAGAGCATGCGCTATGTTAGCCCTTTTGGAACAGGGGAAACAAGCTCATGGAGTCATGGTAAAGTGTGGAATCGTGCAAAATGTGGTAGTTAATAGTGCATTAATGGATATGTATTTCAAGTGCAGCAGCCCCTGTGATGGACACCTGGTATTTAGCAAGTCTCCGGATAAGAATGTGATTACTTGGACGGCTCTCATATCTGGGTATGGGCATAATGGAAGGGTTGCGGAGGTTTTACAACTCTTTCAGATTATGATTGAAGAAGGTTTGAAACCCAATTATGTCACCTTTCTTGTAGTTCTTTCTGCCTGTAGCCATGGGGGACTTGTTGATGAGGGATGGAAATATTTCATATCTATGAAAGAGAAATACGGAATCCAACCACGCGGGAAACATTATGCTGCCATGGTTGATCTATTAGGACGTGCGGGAAGGTTAGAGGATGCTTACAAGTTTGTTAGTAGCTCACCATGTAAGGAAAACACAGTAGTTTGGGGTGCTTTGCTTGGGGCTTGTAGAATTCATGGAAATTTTGAGCTGCTGAAATTATCAGCAAAGAGGTTCTTTGAGTCGGAGCAAGAAAATCCGGGGAAGTATGTTGTCCTGTCAAATACTTATGCCAGTTATGGATTGTGGGAAAATGTGGCACAAGTTAGGAGCTTGATGAATGACTCTGGGTTTAAAAAGGACCCTGGATATAGCAGAATTGAGGTTCAAAATGAGGTCCACTTCTTCTTTAAGGGCGATAACACACACAAGGACGCTGAGAATGCATACCAAATGTTGAATGAGTTGACTTGTGTGCTAGTCGACAATGGTTATATTCCTGACGTAACTTCTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_187787.p1 GENE.S_Transcript_187787~~S_Transcript_187787.p1 ORF type:5prime_partial len:378 (+),score=58.90,PPR_2|PF13041.2|5.3e+02,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|5.7e+02,PPR_2|PF13041.2|1.7e-13,PPR_2|PF13041.2|0.052,PPR_2|PF13041.2|18,PPR_2|PF13041.2|2.6e+03,PPR_2|PF13041.2|1.8e+03,PPR|PF01535.16|14,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|5.7e-08,PPR|PF01535.16|0.0043,PPR|PF01535.16|1.2,PPR|PF01535.16|3.5e+02,PPR|PF01535.16|6.8e+02,PPR|PF01535.16|9.5e+03,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|5.1e-06,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|12,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|9.1e+02,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|48,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|7.1e-06,PPR_1|PF12854.3|4.8,PPR_1|PF12854.3|0.15 S_Transcript_187787:2-1135(+)
RGAYEWGKIIHAHMVVVGFALNEYLKTKLLILYAKAGNLGTACILFDKLPQKSLISWNAMIAGYVQKGCEDMGLSLYDKMRCGGVIPDQFTFASVFRACAMLALLEQGKQAHGVMVKCGIVQNVVVNSALMDMYFKCSSPCDGHLVFSKSPDKNVITWTALISGYGHNGRVAEVLQLFQIMIEEGLKPNYVTFLVVLSACSHGGLVDEGWKYFISMKEKYGIQPRGKHYAAMVDLLGRAGRLEDAYKFVSSSPCKENTVVWGALLGACRIHGNFELLKLSAKRFFESEQENPGKYVVLSNTYASYGLWENVAQVRSLMNDSGFKKDPGYSRIEVQNEVHFFFKGDNTHKDAENAYQMLNELTCVLVDNGYIPDVTSE*

Click here to download the sequence:
Link to NCBI Protein BLAST