Transcript Information: S_Transcript_187933.p1


Annotated TAIR IDAT5G11560.1
Annotated Gene Namecatalytics
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3709734-3713994 | Reverse length=982
E-Value2.5E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.286657917076
Replicate 24.5902448072682
Replicate 35.0748468417961
Condition 2: 8 Hour
Replicate 17.1561712473601
Replicate 26.156012041804
Replicate 35.2931970562705
Condition 3: 24 Hour
Replicate 13.6652489078178
Replicate 25.6279263645963
Replicate 34.4011621109599


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_187933.p1 GENE.S_Transcript_187933~~S_Transcript_187933.p1 ORF type:5prime_partial len:149 (-),score=29.13 S_Transcript_187933:18-464(-)
GTCGTGGACAAAATTGATGGTGCTGTAGCTGTTAGTGATGTGCTCTCATACGCTGAAGGGCTGAAAGCTGTCGGAATCGTACAATATGGGGGTAATAAAATTCATCTGATAGTAAAGCTTGGTCATGACTATAGTGAGAACCTTTTAAAGGAAAGCATTCAGATGGACCATCACCGAGGTCATGTTCAGAAGGTTTTCATTAATAATTATATCCGGACTGACAGGTCTTATGGGTTTAGGGCTTTGGTTGTCATGGAAGATCACTCTTTATTGCTCCTGCAACAAGGTGAGATTGTCTGGAGTAGAGAAGATGGGCTTGCTTCAGTTGTAGATGTATCCACCTCAGAGCTACCTGTGGAAAAGAAAGGTGTGTCGGTTGCCAAAGTAGAACAGGGGCTTCTTGAATGGCTGAAGGTGAGGAATTTAATGTATATGGATATGAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_187933.p1 GENE.S_Transcript_187933~~S_Transcript_187933.p1 ORF type:5prime_partial len:149 (-),score=29.13 S_Transcript_187933:18-464(-)
VVDKIDGAVAVSDVLSYAEGLKAVGIVQYGGNKIHLIVKLGHDYSENLLKESIQMDHHRGHVQKVFINNYIRTDRSYGFRALVVMEDHSLLLLQQGEIVWSREDGLASVVDVSTSELPVEKKGVSVAKVEQGLLEWLKVRNLMYMDMS*

Click here to download the sequence:
Link to NCBI Protein BLAST