Transcript Information: S_Transcript_187970.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value6E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15563158617065
Replicate 20.38706648346517
Replicate 30.3235567733965
Condition 2: 8 Hour
Replicate 10.62354942447757
Replicate 20.78497714525356
Replicate 30.49861631824518
Condition 3: 24 Hour
Replicate 10.38324357001042
Replicate 20.1325369098032
Replicate 30.58998934280973


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_187970.p1 GENE.S_Transcript_187970~~S_Transcript_187970.p1 ORF type:5prime_partial len:171 (-),score=23.14,zf-RVT|PF13966.2|5.7e-16,zf-RVT|PF13966.2|6.9e+03 S_Transcript_187970:21-533(-)
TCGACTCTCTCCACTCCTTTCTCTGCGGCTTCTGTTATTTGGAAGTCCAAAGTGCCCTCTAAGGTGTGTGCTTTTCTGTGGACAGTTGCCTTGGACCGAGTTAATACTCATGATGTTTTGCAACGACGTTATCCACGTTGGTGCCTTTCTCCTGGAGTTTGTGTTAAGTGTCGAAGAGAGAATGAGACCAATTCTCATCTCTTCTTGACTTGTGATGTGGCGCAAGGATTATGGTGTTGGCTTTTTGGGGTGAGGGGAGAGAGTTGGGTTTGCCCACCAACTGTTTCTCACCTTTTGCTGGGTCGATACGTGGGCTTTGGAAGAGGAAAGGATCAGAGCTTATTGTGGCGTTGTGCTATGGTGGCTTTGCTTTGGAGTCTTTGGCTAGAGGAATGCGAGGATTTTCCATGGGTGATAACCCCCCTGCTTTTGTCTGGGATAGAGTGGTGTATAGGGTCTCTTTATGGGCCCAGGCTTTTAGAGCTTTTCATGATGTTCCTTTGTCTGTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_187970.p1 GENE.S_Transcript_187970~~S_Transcript_187970.p1 ORF type:5prime_partial len:171 (-),score=23.14,zf-RVT|PF13966.2|5.7e-16,zf-RVT|PF13966.2|6.9e+03 S_Transcript_187970:21-533(-)
STLSTPFSAASVIWKSKVPSKVCAFLWTVALDRVNTHDVLQRRYPRWCLSPGVCVKCRRENETNSHLFLTCDVAQGLWCWLFGVRGESWVCPPTVSHLLLGRYVGFGRGKDQSLLWRCAMVALLWSLWLEECEDFPWVITPLLLSGIEWCIGSLYGPRLLELFMMFLCLF*

Click here to download the sequence:
Link to NCBI Protein BLAST