Transcript Information: S_Transcript_188056.p1


Annotated TAIR IDAT5G58000.1
Annotated Gene NameReticulon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23477416-23479496 | Forward length=487
E-Value8E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.81172552787043
Replicate 21.009408672566
Replicate 31.0446865755416
Condition 2: 8 Hour
Replicate 11.207974179184
Replicate 21.2185102744949
Replicate 31.0681143680056
Condition 3: 24 Hour
Replicate 11.0470314527082
Replicate 21.431918378462
Replicate 31.3187997074571


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_188056.p1 GENE.S_Transcript_188056~~S_Transcript_188056.p1 ORF type:complete len:459 (-),score=107.88 S_Transcript_188056:7-1353(-)
ATGGCAGGAGCAGGAGGATCAGTTTGGGAGAGTAGAAGGAAAAGTGATCAAAAACTGAATAAACTAAAAGGGAATGGGAGTCCTGATCAGGATAATCAAGATCACAGGCTTAGGCTTAGAATTTCTCCCAAAGCCAGGAATTCAGATTGGGATGGTGGTGGTGATGAGTTGAAGAATGCACCTGCTTCCACTTCTTTGGTTAAATCCAATCGTAGTAATTGTAGTAGCAGCAGCAGCAGCAGCGGTAGTAGCAGTAGCAGAAATGCAGATGATCTGTTAAGCAGTCCAATAAGGCTGAAGAAAACCAGATCTGAGCCACTTAAGGCTCAGATTCGGAGTCCAGTGGTATTGAGAAAGGTGAAATCTCAAGTGAAACCAGTAGCAGTCAATGTTAACAATGAGGAGGAGGAGAATGAGATGGCGACCTGTGACACAACTACAAATACAAATACCAGTAGTAGTAGTTTAAATTCCAAAGCAGAGGAGGAATGCTACTCTGTCTCTATTAATCATGCTCATGCACTGGGGAAGAATTCCAATTCGGATTCCTATGAGTCAAGTTGCAAGATGAACACCAAGTCCAAGAAGCAGCCGGAATTTGATCCTTTAGGTATTAATATGAATATGAACATTGGTCATCCGGGCAAGATAAATTCCAGTTCCAATTCAGCAGTGCAAGAGTCAGCAGCAGCCACCTGTGACTGTGAAGGAGGAGGAGAAGCTTGTCACCAACCTGATCAAGACCACAAGGTTACTGCAACACCTCATCAGAATCAGGATGATGGAGATGAAAATAATACTAATATTAATGTTCCAGATCATGACGGAGTTGAAAAGGAGGGGCCTGTTAATAATAATGACGAAGAAATCGAGGTAGAGTTGGTGAGAGAAGGCGACAATTCAGGTTCAGGCAAATTGATTAATTCTGTCAAGGAGGAGAAAATCATACCGGAAACCAAAAAGGCTACTAGTAGTAGTAGTAGTAGTAGTAGTACTGCCAAAGTGTCACCTTCCCTGCTGCACAAGTCCCACCGTCAACCTCAGCTCATTAAAAAATCCACCACCAATGCCAGTGCTGATGCTCCGTCGTCTCCACCTAACCAATATAAAAGTAAGTTATCTGATGATTCTCACCCAGGCCCTCAAGCTCATGCTCATGGTCGGCTTCAGAGTTTAGTGGATTTAGTTATGTGGCAAGATGTATCCAGATCGGCTTTCGTCTTCGGACTTGGCACCTTTCTCATCATCTCATCCTCCTATGCAAAAGACCTCAACATCAGGTTCCTTCTTAGTACACTACTTCACTTCAATCTACTACTACTACAGAAGGCTAGCCTAGCCATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_188056.p1 GENE.S_Transcript_188056~~S_Transcript_188056.p1 ORF type:complete len:459 (-),score=107.88 S_Transcript_188056:7-1353(-)
MAGAGGSVWESRRKSDQKLNKLKGNGSPDQDNQDHRLRLRISPKARNSDWDGGGDELKNAPASTSLVKSNRSNCSSSSSSSGSSSSRNADDLLSSPIRLKKTRSEPLKAQIRSPVVLRKVKSQVKPVAVNVNNEEEENEMATCDTTTNTNTSSSSLNSKAEEECYSVSINHAHALGKNSNSDSYESSCKMNTKSKKQPEFDPLGINMNMNIGHPGKINSSSNSAVQESAAATCDCEGGGEACHQPDQDHKVTATPHQNQDDGDENNTNINVPDHDGVEKEGPVNNNDEEIEVELVREGDNSGSGKLINSVKEEKIIPETKKATSSSSSSSSTAKVSPSLLHKSHRQPQLIKKSTTNASADAPSSPPNQYKSKLSDDSHPGPQAHAHGRLQSLVDLVMWQDVSRSAFVFGLGTFLIISSSYAKDLNIRFLLSTLLHFNLLLLQKASLAI*

Click here to download the sequence:
Link to NCBI Protein BLAST