Transcript Information: S_Transcript_188080.p1


Annotated TAIR IDAT5G24270.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)SOS3, CBL4, ATSOS3
Annotation TypeHomolog
Chromosome Positionchr5:8238781-8240179 | Reverse length=222
E-Value2E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.438540607307
Replicate 22.087020633819
Replicate 32.575337020683
Condition 2: 8 Hour
Replicate 14.2266539367291
Replicate 23.4263191610392
Replicate 33.6486585990509
Condition 3: 24 Hour
Replicate 11.0824041369213
Replicate 21.020892413349
Replicate 31.5905793768992


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_188080.p1 GENE.S_Transcript_188080~~S_Transcript_188080.p1 ORF type:complete len:222 (+),score=51.22,EF-hand_1|PF00036.28|33,EF-hand_1|PF00036.28|2.7e-05,EF-hand_1|PF00036.28|7.7e-05,EF-hand_1|PF00036.28|0.00094,EF-hand_7|PF13499.2|0.041,EF-hand_7|PF13499.2|0.016,EF-hand_7|PF13499.2|1.9e-09,EF-hand_6|PF13405.2|4.4,EF-hand_6|PF13405.2|0.021,EF-hand_6|PF13405.2|0.0011,EF-hand_6|PF13405.2|0.87,EF-hand_5|PF13202.2|30,EF-hand_5|PF13202.2|0.046,EF-hand_5|PF13202.2|0.25,EF-hand_5|PF13202.2|0.0056 S_Transcript_188080:126-791(+)
ATGGGTTGTGCCCGGTCTACACCAAGATTGCCTGCTTCTGATAAATTCCCTGTTCTTGCTGCTGAAACGCCTTTCAATGTGGATGAAGTGGAAACTCTATATGAATTGTACAGTAAACTCAGCAATTCTGTTATTAAAGATGGTTTCATACAAAAGGAAGATCTTCAGCTTGCCTTATTCAGAACTACCAACAGCAAGAACCTCTTTCTTGATAGAATGTTTGATCTCTTTGATGTCAAGCAAAATGGCCGCATTGAATTTGGAGAGTTTGTTCGAACATTGAGTATCTTCCACCCTAAAACTTCTGTAACAGAGAAAAGTAACTATGCATTCCGGTTGTATGATCTTAGGGGAACTGGCTTTATTGAGTATGAAGAGTTAAGGGAAATGGTGCTTGCAATTCTGCATGAATCAGAATTGGTTCTTTCGAGTGATTTAGTTGACAGCATTGTAGACAAGACGTTCAAGGAAGTAGATCTAAAGGGCGACAAGAAAATCGATATGGAAGAGTGGGAAGAATATGTTGCCAAAAACCCATCTTTGCTAAAGAACATGACGCTTCCCTATCTGATGGACTTTAACCACGCATTTCCTAGCTTGGTGGTGAACAAGGAGGCAGAGAGGCAACTCAGGCAAGAGCTTACAGAGACTGAAAGAAAAGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_188080.p1 GENE.S_Transcript_188080~~S_Transcript_188080.p1 ORF type:complete len:222 (+),score=51.22,EF-hand_1|PF00036.28|33,EF-hand_1|PF00036.28|2.7e-05,EF-hand_1|PF00036.28|7.7e-05,EF-hand_1|PF00036.28|0.00094,EF-hand_7|PF13499.2|0.041,EF-hand_7|PF13499.2|0.016,EF-hand_7|PF13499.2|1.9e-09,EF-hand_6|PF13405.2|4.4,EF-hand_6|PF13405.2|0.021,EF-hand_6|PF13405.2|0.0011,EF-hand_6|PF13405.2|0.87,EF-hand_5|PF13202.2|30,EF-hand_5|PF13202.2|0.046,EF-hand_5|PF13202.2|0.25,EF-hand_5|PF13202.2|0.0056 S_Transcript_188080:126-791(+)
MGCARSTPRLPASDKFPVLAAETPFNVDEVETLYELYSKLSNSVIKDGFIQKEDLQLALFRTTNSKNLFLDRMFDLFDVKQNGRIEFGEFVRTLSIFHPKTSVTEKSNYAFRLYDLRGTGFIEYEELREMVLAILHESELVLSSDLVDSIVDKTFKEVDLKGDKKIDMEEWEEYVAKNPSLLKNMTLPYLMDFNHAFPSLVVNKEAERQLRQELTETERKV*

Click here to download the sequence:
Link to NCBI Protein BLAST