Transcript Information: S_Transcript_188084.p1


Annotated TAIR IDAT5G24270.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)SOS3, CBL4, ATSOS3
Annotation TypeHomolog
Chromosome Positionchr5:8238781-8240179 | Reverse length=222
E-Value3E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6119257727156
Replicate 25.4814383993826
Replicate 37.216722815322
Condition 2: 8 Hour
Replicate 19.5368205144943
Replicate 28.8931572232454
Replicate 38.3409838454275
Condition 3: 24 Hour
Replicate 16.6484428014852
Replicate 25.2084535920798
Replicate 36.1096877751524


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_188084.p1 GENE.S_Transcript_188084~~S_Transcript_188084.p1 ORF type:complete len:161 (-),score=43.19,EF-hand_1|PF00036.28|2,EF-hand_1|PF00036.28|5.6e-06,EF-hand_1|PF00036.28|3.2e-05,EF-hand_6|PF13405.2|0.091,EF-hand_6|PF13405.2|0.0023,EF-hand_6|PF13405.2|0.00057,EF-hand_5|PF13202.2|2.1,EF-hand_5|PF13202.2|0.0048,EF-hand_5|PF13202.2|0.016,EF-hand_7|PF13499.2|0.00015,EF-hand_7|PF13499.2|0.0025,EF-hand_8|PF13833.2|98,EF-hand_8|PF13833.2|0.021,EF-hand_8|PF13833.2|0.022 S_Transcript_188084:333-815(-)
ATGGGTTGTGGGATTTCCAGAGATGATGCAAGATTGCCTGCCTCTGATAGATTTTCTGTTCTTGCTGCTGAGACTGCTTTTAGTGTGGATGAAGTGGAATCTTTGTTTGATTTATACAATAAACTCAGCAATTCTGTTGTAAAAGATGGTTATATTCAAAAGGAGGAACTTCAACTTGCCCTATTCAAGTGCAGTGATAACAGAAGCCTCTTCCTTGACAAAATGTTTGATCTCTTTGATGTCAAGAAGAATGGTCGGATCGAGTTTGGAGAATTTGTTCGAACGTTGAGTGTCTTCCACCCCAAAACTCCTGAAACTAAGAAAATTGTAGATGCATTTCGGTTGTACGATCTTAGAGGAACTGGGTACATTGAGCATGAAGAGTTGAAGGAAATGGTGTTAGCCCTTCTCCAGGAATCAGACTTGCATCTCTCAAATGAGTTGAATGTATTGTGGATAAGACATTCAAGGAAGTCGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_188084.p1 GENE.S_Transcript_188084~~S_Transcript_188084.p1 ORF type:complete len:161 (-),score=43.19,EF-hand_1|PF00036.28|2,EF-hand_1|PF00036.28|5.6e-06,EF-hand_1|PF00036.28|3.2e-05,EF-hand_6|PF13405.2|0.091,EF-hand_6|PF13405.2|0.0023,EF-hand_6|PF13405.2|0.00057,EF-hand_5|PF13202.2|2.1,EF-hand_5|PF13202.2|0.0048,EF-hand_5|PF13202.2|0.016,EF-hand_7|PF13499.2|0.00015,EF-hand_7|PF13499.2|0.0025,EF-hand_8|PF13833.2|98,EF-hand_8|PF13833.2|0.021,EF-hand_8|PF13833.2|0.022 S_Transcript_188084:333-815(-)
MGCGISRDDARLPASDRFSVLAAETAFSVDEVESLFDLYNKLSNSVVKDGYIQKEELQLALFKCSDNRSLFLDKMFDLFDVKKNGRIEFGEFVRTLSVFHPKTPETKKIVDAFRLYDLRGTGYIEHEELKEMVLALLQESDLHLSNELNVLWIRHSRKSI*

Click here to download the sequence:
Link to NCBI Protein BLAST