Transcript Information: S_Transcript_188179.p1


Annotated TAIR IDAT5G15390.1
Annotated Gene NametRNA/rRNA methyltransferase (SpoU) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4995333-4997255 | Forward length=350
E-Value7.7E-139
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.051307455061
Replicate 216.259973673894
Replicate 315.562637571915
Condition 2: 8 Hour
Replicate 121.559093224718
Replicate 225.068729023694
Replicate 322.717437584487
Condition 3: 24 Hour
Replicate 114.902399970296
Replicate 212.294341622238
Replicate 317.068068405654


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_188179.p1 GENE.S_Transcript_188179~~S_Transcript_188179.p1 ORF type:5prime_partial len:365 (+),score=50.39,SpoU_methylase|PF00588.15|6.9e-33 S_Transcript_188179:3-1097(+)
ACATTACACTGGTATAGCCTTGGGTCTCCTTCTTTCTCGCACACCACCATGAGCCTATGCAGCATCCTTACTCGAACCTCACTTTCTCCTTTCCAACCCTCTCTCAACCCCAATCACTGCTCCCATTTCCCCACATTAGGTTTCCACTTCAAGCAACGTTACCAACACCACTGCCCCAAATTCCAATGCACACCTTACACCTCACTTGCTCAATTGATCCTCGAACCATCCGAAGACCTCTCAAAAGACACAGTAGAACACCTTCTCTCTCCTCAAAACAAGGATGCCATCTCAAGACTAATGAAAATGGACCGAAAATCCACCAAAATTGCTAAACCCTCTTCTGGGCGTTGGTTTCCTTATCTTGATAACTTCAATCCAGGTGGTATTCCTTTGAGTAGTAAAGAGGTCATTGAGGCCTTAGAGCCTCATATACTGGATGTTCGGAAAGAGAGATTTAGGAACGTGGTGAAAAATCGGAGTTACGCTGTTTGTCTTGTCGTTGAAGGATTGACTGATTTCGGAAACGTTTCGGCCACGTTTCGCTCCGCTGATGCTCTAGGGTTTCAGTCTGTTCATGTCGTTTCTTGCGACAGCTCCAAAAGGTACAGAGATAATCGGCATGTTAGCATGGGTGCAGAGAAGTGGCTGGACATTGAAGTGTGGAACTCCACTAAAGAATGCTTTGATGTTTTGAGATCACGTGGATACAGAATTGCTACAACACATCTAGGAAAAGATTCGGTGTCTATTTATGACATGGATTGGTCTTGTCCAACTGCCATTATTGTTGGGAATGAGAACAAGGGAATTAGTGATGAAGCTTTAGAGTTATCGGATTTGCACTGCAGTATTCCAATGCAGGGCATGGTCGATTCTTTTAATGTTTCAGTTGCTGCTGGGTTGCTTATGCATCATGCTGTTTGTGACAGAACGTCGCGCCTGGGTTCTCATGGTGATCTAACGTCAGAAGAAAGTCAAATTCTTCTTGCTGAATTTTCACTTCGTCACAGCAACAGTGCAATAAGCATTGCTTGTGAGTATGCAAAAGCCCCCCATCCCCGTACCAAAGCTATGATGGATGACATGGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_188179.p1 GENE.S_Transcript_188179~~S_Transcript_188179.p1 ORF type:5prime_partial len:365 (+),score=50.39,SpoU_methylase|PF00588.15|6.9e-33 S_Transcript_188179:3-1097(+)
TLHWYSLGSPSFSHTTMSLCSILTRTSLSPFQPSLNPNHCSHFPTLGFHFKQRYQHHCPKFQCTPYTSLAQLILEPSEDLSKDTVEHLLSPQNKDAISRLMKMDRKSTKIAKPSSGRWFPYLDNFNPGGIPLSSKEVIEALEPHILDVRKERFRNVVKNRSYAVCLVVEGLTDFGNVSATFRSADALGFQSVHVVSCDSSKRYRDNRHVSMGAEKWLDIEVWNSTKECFDVLRSRGYRIATTHLGKDSVSIYDMDWSCPTAIIVGNENKGISDEALELSDLHCSIPMQGMVDSFNVSVAAGLLMHHAVCDRTSRLGSHGDLTSEESQILLAEFSLRHSNSAISIACEYAKAPHPRTKAMMDDMA*

Click here to download the sequence:
Link to NCBI Protein BLAST