Transcript Information: S_Transcript_188190.p1


Annotated TAIR IDAT2G35030.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:14761080-14762963 | Reverse length=627
E-Value6E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1730248478317
Replicate 20.30389517296852
Replicate 30.76209653238019
Condition 2: 8 Hour
Replicate 11.6449336883739
Replicate 22.1570652958414
Replicate 32.290132387312
Condition 3: 24 Hour
Replicate 10.30089371199165
Replicate 20.49947794107653
Replicate 30.34741107996028


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_188190.p1 GENE.S_Transcript_188190~~S_Transcript_188190.p1 ORF type:complete len:363 (+),score=76.86,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|0.00012,PPR|PF01535.16|1.4e-08,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|0.0015,PPR|PF01535.16|4.2e-06,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|14,PPR|PF01535.16|3.8e-07,PPR|PF01535.16|0.0013,PPR_2|PF13041.2|0.00063,PPR_2|PF13041.2|5.1e-05,PPR_2|PF13041.2|9.5e-09,PPR_2|PF13041.2|7.7e-06,PPR_2|PF13041.2|0.00013,PPR_2|PF13041.2|7.4e-05,PPR_2|PF13041.2|5.1e-10,PPR_2|PF13041.2|2e+03,PPR_2|PF13041.2|1.2e-11,PPR_2|PF13041.2|0.18,PPR_1|PF12854.3|0.00039,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|0.00012,PPR_1|PF12854.3|5.9,PPR_1|PF12854.3|5.4e+03,PPR_1|PF12854.3|7e+03,PPR_1|PF12854.3|6.9e-06,PPR_1|PF12854.3|0.015,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.00058,PPR_3|PF13812.2|0.66,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|0.51,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.00038,PPR_3|PF13812.2|0.23 S_Transcript_188190:408-1496(+)
ATGTCTACAAGAGATGTTACCTGGAATACCCTCATTACTGGGTACTGGCAAAATGGCTTCTTTGATGAATCTAGGAGACTATTCAACTTGATGCCAGGAAGGAATGTCGTCTCTTGGAATTCCATGATCGCTGGGTGCATTGAAAATGACATGGTTGATCAAGGGTTTGAGTATTTTTGTATTATGCCCAACAGAAATGTGGCATCTTCAAATGCCATGATATCAGGTTTTGTCAAGTGTGGGAGGATAGAGGAGGCATATCGCCTTTTTGAGGAAATGCCACGCAGGAATGTCGTCTCTTGCACTGCTATGATTGATGGGTTTCTTCAGAAAGGGATGGTTGAGAAGGCTAGGGCTTTGTTTGATCAGATTCCTTGCAAGAACAGTGTTACTTGGACTGTAATGATCAATGAGTATATCGAGAATGCAATGTTTGCGGAGGCTAAGGACTTGTTTCAACAGATGCCTTATAAAACCACCGTTCCCACTACTGCTATGATCACTGGCTACTGTAACGAAGGCAAGATGGAGAAAGCCAGGGCTTTGTTTGATAAACTTGAGCAAAAGGACCTTGTTGCTTGGAATGCTATGATTACAGGTTATTTTCAAAATAGGGGTGGTGAGGAGGCCATGATGTTGCTTCCAGAAATGCTTAGAAGTGGTCTGCAACCAGACGAGACAACGATGGTTTCTATTCTGACTGCCTGCTTGTCCCTGACATCCTTGAAAGAAGGCAGGCAAAATCACTCACTCATTGTTAAGTATGGGCTTGTGCTGTATGTATCAATTGGCAATGCCTTGGTTTCCATGTACGGCAAGTGTGGTGGTGTTTCTGATTCAGAGTTAGCTTTCAAAGAGATTCACAACCCAGACATTGTCTCATGGAACGCCCTTATTGCTGCTTTTGCAAAACATGGTCTCTATGGGAAAGCCCATACACTCTTCAACCAGATGGTTTCAACTGGCTTTGAGCCAGATGGGATAGCTTTTCTTAGTCTGTTGTCTGCATGTGCTCATGCTGGTAAGGTGAATGAGAGTATGGCCTTATTTGACTCCATGGTCAACAGTTATAAAATCCCCCAGGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_188190.p1 GENE.S_Transcript_188190~~S_Transcript_188190.p1 ORF type:complete len:363 (+),score=76.86,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|0.00012,PPR|PF01535.16|1.4e-08,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|0.0015,PPR|PF01535.16|4.2e-06,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|14,PPR|PF01535.16|3.8e-07,PPR|PF01535.16|0.0013,PPR_2|PF13041.2|0.00063,PPR_2|PF13041.2|5.1e-05,PPR_2|PF13041.2|9.5e-09,PPR_2|PF13041.2|7.7e-06,PPR_2|PF13041.2|0.00013,PPR_2|PF13041.2|7.4e-05,PPR_2|PF13041.2|5.1e-10,PPR_2|PF13041.2|2e+03,PPR_2|PF13041.2|1.2e-11,PPR_2|PF13041.2|0.18,PPR_1|PF12854.3|0.00039,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|0.00012,PPR_1|PF12854.3|5.9,PPR_1|PF12854.3|5.4e+03,PPR_1|PF12854.3|7e+03,PPR_1|PF12854.3|6.9e-06,PPR_1|PF12854.3|0.015,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.00058,PPR_3|PF13812.2|0.66,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|0.51,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.00038,PPR_3|PF13812.2|0.23 S_Transcript_188190:408-1496(+)
MSTRDVTWNTLITGYWQNGFFDESRRLFNLMPGRNVVSWNSMIAGCIENDMVDQGFEYFCIMPNRNVASSNAMISGFVKCGRIEEAYRLFEEMPRRNVVSCTAMIDGFLQKGMVEKARALFDQIPCKNSVTWTVMINEYIENAMFAEAKDLFQQMPYKTTVPTTAMITGYCNEGKMEKARALFDKLEQKDLVAWNAMITGYFQNRGGEEAMMLLPEMLRSGLQPDETTMVSILTACLSLTSLKEGRQNHSLIVKYGLVLYVSIGNALVSMYGKCGGVSDSELAFKEIHNPDIVSWNALIAAFAKHGLYGKAHTLFNQMVSTGFEPDGIAFLSLLSACAHAGKVNESMALFDSMVNSYKIPQV*

Click here to download the sequence:
Link to NCBI Protein BLAST