Transcript Information: S_Transcript_188192.p1


Annotated TAIR IDAT4G16835.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:9472763-9474803 | Forward length=656
E-Value5E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70732229196493
Replicate 20.58638643342232
Replicate 30.5514439360545
Condition 2: 8 Hour
Replicate 11.4878179291023
Replicate 21.6351517278206
Replicate 31.6287856973906
Condition 3: 24 Hour
Replicate 10.29029745502451
Replicate 20.30118022028369
Replicate 30.33517666983543


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_188192.p1 GENE.S_Transcript_188192~~S_Transcript_188192.p1 ORF type:complete len:301 (+),score=57.50,PPR|PF01535.16|3.7e+03,PPR|PF01535.16|11,PPR|PF01535.16|8.8e-06,PPR|PF01535.16|0.036,PPR|PF01535.16|0.6,PPR|PF01535.16|5.5,PPR_2|PF13041.2|0.37,PPR_2|PF13041.2|1.4e+03,PPR_2|PF13041.2|5.7e-06,PPR_2|PF13041.2|2.1,PPR_2|PF13041.2|2,PPR_2|PF13041.2|2e+02,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|9.4e+03,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|0.0027,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|13,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|23,PPR_1|PF12854.3|4.4e+03,PPR_1|PF12854.3|5.3e+03,PPR_1|PF12854.3|0.00094,PPR_1|PF12854.3|7.7,PPR_1|PF12854.3|5.6 S_Transcript_188192:1203-2105(+)
ATGATGTTGCTTCCAGAAATGCTTAGAAGTGGTCTGCAACCAGACGAGACAACGATGGTTTCTATTCTGACTGCCTGCTTGTCCCTGACATCCTTGAAAGAAGGCAGGCAAAATCACTCACTCATTGTTAAGTATGGGCTTGTGCTGTATGTATCAATTGGCAATGCCTTGGTTTCCATGTACGGCAAGTGTGGTGGTGTTTCTGATTCAGAGTTAGCTTTCAAAGAGATTCACAACCCAGACATTGTCTCATGGAACGCCCTTATTGCTGCTTTTGCAAAACATGGTCTCTATGGGAAAGTCCATACACTCTTCAACCAGATGGCTTCAACTGGTCTGTTGTATGCATGTGCTCATGCTGGTAAGGTGAATGAGAGTATGGCCTTATTTGACTCCATGGTCAACAGTTATAAAATCCCCCCCCCCAGGTCTGAGCACTATGCTTGTTTAGTTGACATATTAAGTCGAGGGGGCCAATTGAAGAAGGCGTACAGACTCATTAAGGTGATGCCATTTGAAGGGGACTCTGGTGTTTGGGATACTCTTCTTGCAGCTTGCCATGTTCACTTGAATGCTGAGCTCGGTGAATTCGCTGCAGAGAAATTATTGACATTGGACCCTCAGAATGCTGGTGCATATGTGATGTTATCAAATAGATATGCTGCATATGGGATGTGGAAGGAGGTTGCCAAGGTGAGATGCTTAATGAAAGAGCAGGGGGTTAAGAAGCAGAGTGCATATAGCTGGATAGATCTTGGTGACAAAGTGCGTGTTTTTGTAGGTGAGGGGACTTCTCTTCTGGAAATTGATAAAATATGTTTATTGTTAAAGCGGATTGGTTTGCACGTAAAGACTATGAAGGGTGATTCGGACTTTGTTTCGGAGCTGGCTTATTGTGGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_188192.p1 GENE.S_Transcript_188192~~S_Transcript_188192.p1 ORF type:complete len:301 (+),score=57.50,PPR|PF01535.16|3.7e+03,PPR|PF01535.16|11,PPR|PF01535.16|8.8e-06,PPR|PF01535.16|0.036,PPR|PF01535.16|0.6,PPR|PF01535.16|5.5,PPR_2|PF13041.2|0.37,PPR_2|PF13041.2|1.4e+03,PPR_2|PF13041.2|5.7e-06,PPR_2|PF13041.2|2.1,PPR_2|PF13041.2|2,PPR_2|PF13041.2|2e+02,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|9.4e+03,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|0.0027,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|13,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|23,PPR_1|PF12854.3|4.4e+03,PPR_1|PF12854.3|5.3e+03,PPR_1|PF12854.3|0.00094,PPR_1|PF12854.3|7.7,PPR_1|PF12854.3|5.6 S_Transcript_188192:1203-2105(+)
MMLLPEMLRSGLQPDETTMVSILTACLSLTSLKEGRQNHSLIVKYGLVLYVSIGNALVSMYGKCGGVSDSELAFKEIHNPDIVSWNALIAAFAKHGLYGKVHTLFNQMASTGLLYACAHAGKVNESMALFDSMVNSYKIPPPRSEHYACLVDILSRGGQLKKAYRLIKVMPFEGDSGVWDTLLAACHVHLNAELGEFAAEKLLTLDPQNAGAYVMLSNRYAAYGMWKEVAKVRCLMKEQGVKKQSAYSWIDLGDKVRVFVGEGTSLLEIDKICLLLKRIGLHVKTMKGDSDFVSELAYCG*

Click here to download the sequence:
Link to NCBI Protein BLAST