Transcript Information: S_Transcript_188229.p1


Annotated TAIR IDAT5G27490.1
Annotated Gene NameIntegral membrane Yip1 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9703130-9704653 | Reverse length=282
E-Value4.8E-136
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6764095266255
Replicate 22.3452571576886
Replicate 33.1948046758993
Condition 2: 8 Hour
Replicate 12.0149975102803
Replicate 22.9065787602794
Replicate 31.0909685782077
Condition 3: 24 Hour
Replicate 11.6340660878791
Replicate 24.015242208408
Replicate 32.1845865232778


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_188229.p1 GENE.S_Transcript_188229~~S_Transcript_188229.p1 ORF type:complete len:254 (+),score=30.06,Yip1|PF04893.13|3.2e+02,Yip1|PF04893.13|8.1e-16 S_Transcript_188229:359-1120(+)
ATGTCTCCGTCAAATTCGCCGATTCGAATCTTCAGACATTTCCGCCATCAGAAGCTCAAGGCAAGATTTCCGGTGTTGCTCGGCCTCCTCGTGATGCTGATGACATTCTCAAAACCTGGTGCTGGTTCTGATGAACCTCAATCAAGTGGTTGGTTCAGGGTATTTTCTGTTGCTGCTTACAAACCATACTTTGATGTTGATACTTCTGATGTCTTGGAGAGGATTAAAGAATCACTTTTTCCATGGAAAGGAAGCTTTACAGAAATGATCTCCAACAATCCTGATTTGTATGGGCCATTTTGGATATGCACTACTTTAATATTCATAGCAGCATCTATCGGCACATTTGTTACATATGTGGCACACAAGCTGCAAACCAAAGAGTGGAATTATGACATCAGCTTGGTGACGTGGTCTGCTGGTTTGTTCTACGGTTATGTGACGATTGTTCCTCTGTGTCTTTATGTGGTCCTCAAGTACTTCTCAGCACCATCTGGCTTTGTCCAGTTGCTCTGCTTATACGGCTACTCCTTGTTTGTGTTTATTCCGGCACTGTGCTTGTCTGTTGTGCCATTGGAATTATTTAGATGGATTATTGCTGGCGTAGCAGGGTTTATGTCTGCAAGTTTCGTTGCTCTCAATCTCAAAGCGCATATTGTATCAGCTGGTGAAAGATGGTTCCTGATTGTAGTGGCGATCTTCCTGTTACAAGTAGCTTTGGCAATTGCACTCAAGATTTACCTATTTACAGTATCAGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_188229.p1 GENE.S_Transcript_188229~~S_Transcript_188229.p1 ORF type:complete len:254 (+),score=30.06,Yip1|PF04893.13|3.2e+02,Yip1|PF04893.13|8.1e-16 S_Transcript_188229:359-1120(+)
MSPSNSPIRIFRHFRHQKLKARFPVLLGLLVMLMTFSKPGAGSDEPQSSGWFRVFSVAAYKPYFDVDTSDVLERIKESLFPWKGSFTEMISNNPDLYGPFWICTTLIFIAASIGTFVTYVAHKLQTKEWNYDISLVTWSAGLFYGYVTIVPLCLYVVLKYFSAPSGFVQLLCLYGYSLFVFIPALCLSVVPLELFRWIIAGVAGFMSASFVALNLKAHIVSAGERWFLIVVAIFLLQVALAIALKIYLFTVSV*

Click here to download the sequence:
Link to NCBI Protein BLAST