Transcript Information: S_Transcript_188230.p1


Annotated TAIR IDAT5G27490.1
Annotated Gene NameIntegral membrane Yip1 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9703130-9704653 | Reverse length=282
E-Value1.4E-172
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.48049385411
Replicate 220.092897632737
Replicate 316.59846247524
Condition 2: 8 Hour
Replicate 117.66960911991
Replicate 217.098484317505
Replicate 319.869415088929
Condition 3: 24 Hour
Replicate 113.575034740584
Replicate 216.512205577053
Replicate 312.701100932576


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_188230.p1 GENE.S_Transcript_188230~~S_Transcript_188230.p1 ORF type:complete len:280 (+),score=41.20,Yip1|PF04893.13|1e-15 S_Transcript_188230:109-948(+)
ATGATGTCCGGCAATTACACCACCATTGACAGCCAGAAAGTCTCCGGATCTGTTCCCGCTGTTGCTGATTCCGGACATGTCTCCGTCAAATTCGCCGATTCGAATCTTCAGACATTTCCGCCATCAGAAGCTCAAGGCAAGATTTCCGGTGTTGCTCGGCCTCCTCGTGATGCTGATGACACATTCTCAAAACCTGGTGCTGGTTCTGATGAACCTCAATCAAGTGGTTGGTTCAGGGTATTTTCTGTTGCTGCTTACAAACCATACTTTGATGTTGATACTTCTGATGTCTTGGAGAGGATTAAAGAATCACTTTTTCCATGGAAAGGAAGCTTTACAGAAATGATCTCCAACAATCCTGATTTGTATGGGCCATTTTGGATATGCACTACTTTAATATTCATAGCAGCATCTATCGGCACATTTGTTACATATGTGGCACACAAGCTGCAAACCAAAGAGTGGAATTATGACATCAGCTTGGTGACGTGGTCTGCTGGTTTGTTCTACGGTTATGTGACGATTGTTCCTCTGTGTCTTTATGTGGTCCTCAAGTACTTCTCAGCACCATCTGGCTTTGTCCAGTTGCTCTGCTTATACGGCTACTCCTTGTTTGTGTTTATTCCGGCACTGTGCTTGTCTGTTGTGCCATTGGAATTATTTAGATGGATTATTGCTGGCGTAGCAGGGTTTATGTCTGCAAGTTTCGTTGCTCTCAATCTCAAAGCGCATATTGTATCAGCTGGTGAAAGATGGTTCCTGATTGTAGTGGCGATCTTCCTGTTACAAGTAGCTTTGGCAATTGCACTCAAGATTTACCTATTTACAGTATCAGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_188230.p1 GENE.S_Transcript_188230~~S_Transcript_188230.p1 ORF type:complete len:280 (+),score=41.20,Yip1|PF04893.13|1e-15 S_Transcript_188230:109-948(+)
MMSGNYTTIDSQKVSGSVPAVADSGHVSVKFADSNLQTFPPSEAQGKISGVARPPRDADDTFSKPGAGSDEPQSSGWFRVFSVAAYKPYFDVDTSDVLERIKESLFPWKGSFTEMISNNPDLYGPFWICTTLIFIAASIGTFVTYVAHKLQTKEWNYDISLVTWSAGLFYGYVTIVPLCLYVVLKYFSAPSGFVQLLCLYGYSLFVFIPALCLSVVPLELFRWIIAGVAGFMSASFVALNLKAHIVSAGERWFLIVVAIFLLQVALAIALKIYLFTVSV*

Click here to download the sequence:
Link to NCBI Protein BLAST