Transcript Information: S_Transcript_18825.p1


Annotated TAIR IDAT1G27650.1
Annotated Gene NameU2 snRNP auxiliary factor small subunit, putative
Annotated Gene Symbol(s)ATU2AF35A
Annotation TypeOrtholog
Chromosome Positionchr1:9615152-9616042 | Forward length=296
E-Value3.1E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.977562895936
Replicate 229.542981907494
Replicate 332.337948201382
Condition 2: 8 Hour
Replicate 141.482266096341
Replicate 245.892936079439
Replicate 339.711716085993
Condition 3: 24 Hour
Replicate 144.063823205342
Replicate 231.512011986291
Replicate 337.48755915007


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18825.p1 GENE.S_Transcript_18825~~S_Transcript_18825.p1 ORF type:5prime_partial len:292 (+),score=50.31,RRM_5|PF13893.2|1.2e-07,RRM_5|PF13893.2|7.6e+03,RRM_1|PF00076.18|2.7e-06,RRM_1|PF00076.18|8e+03 S_Transcript_18825:2-877(+)
CATACCAAACCTAGCATTAGCCCTACCCTTTTGCTCTCGAACATGTATCAACGTCCTGATATGATCACTCCTGGTGTTGATGCTCAGGGTAATCCCATCGATCCTCGTAAGATTCAAGAACATTTCGAGGACTTCTATGAAGATCTTTTTGAGGAACTCAACAAATATGGAGAAATTGAGTCACTGAATGTCTGTGACAACCTGGCTGATCACATGGTGGGCAATGTTTATGTTCAATATAGGGAAGAAGAGCAGGCTGGTAATGCACTGCGCAATTTAAGTGGGAGATACTATGCTGGACGTCCCATCATTGTGGATTTCTCTCCAGTCACAGATTTTCGTGAAGCCACTTGCAGACAATACGAAGAGAACACTTGTAATCGTGGTGGATACTGTAACTTCATGCACCTGAAACGAATTAGCAGGGAGTTGAGGCGCCATTTGTTCGGGAGGTACAGAAGAAGACACAGCAGAAGCCGAAGCCGAAGCCGAAGTCCATACAGACACAGGAGCTATGACTATGACGACCGCCATCATGGGCGTAGTCATAGCAGGAGAAGTTACGATGACAGGGATGCATATTATGAAAGCCGCAGCAGGAGACACAGGAGCACAAGTCCGGACCATAGGCGAGGGAGAAGCAGAAGTCCTAGTAGTAAGAGAGACAGGAGCCCTGTCAGGGAAGGAAGTGAAGAGAGGCGTGCAAAGATTGAGCAATGGAACAGGGAGAAAGAAGAAGCTGAACGGGCCAGGGCCCAGACTGATGCTGGCAACAACAAAAACAATGATGGGTATTATGATGGACCTAAACAGAATGGGGAACAAAACTATTCATACCAGCAGCCACATCCACGGCAGGAAGGATATGGATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18825.p1 GENE.S_Transcript_18825~~S_Transcript_18825.p1 ORF type:5prime_partial len:292 (+),score=50.31,RRM_5|PF13893.2|1.2e-07,RRM_5|PF13893.2|7.6e+03,RRM_1|PF00076.18|2.7e-06,RRM_1|PF00076.18|8e+03 S_Transcript_18825:2-877(+)
HTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQEHFEDFYEDLFEELNKYGEIESLNVCDNLADHMVGNVYVQYREEEQAGNALRNLSGRYYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRELRRHLFGRYRRRHSRSRSRSRSPYRHRSYDYDDRHHGRSHSRRSYDDRDAYYESRSRRHRSTSPDHRRGRSRSPSSKRDRSPVREGSEERRAKIEQWNREKEEAERARAQTDAGNNKNNDGYYDGPKQNGEQNYSYQQPHPRQEGYGY*

Click here to download the sequence:
Link to NCBI Protein BLAST