Transcript Information: S_Transcript_188289.p1


Annotated TAIR IDAT1G21830.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7661429-7662521 | Reverse length=206
E-Value7E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.284919780648
Replicate 211.355847566368
Replicate 311.933535112918
Condition 2: 8 Hour
Replicate 128.381585642655
Replicate 226.648819703204
Replicate 325.077467770566
Condition 3: 24 Hour
Replicate 115.419917758067
Replicate 214.331527908573
Replicate 312.240109784836


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_188289.p1 GENE.S_Transcript_188289~~S_Transcript_188289.p1 ORF type:5prime_partial len:136 (+),score=20.57 S_Transcript_188289:3-410(+)
TCTACCAGCTTAGAAGATGAATCATTTATATCAATAAAGTTTGGGGACAATGGAGTAGCATCATGGGACAAGAGTAGCAGCAATACTGTAGTTTCAAAGGTGAGACTGGAAAATTGCAGCATGACATGGGGCGGTCAAACCTTGGTCAAACACAGCTGCAGTGGCAGTTCTGATAATAATAATAACAATAGCAGTAAAAGTGTGGTGGGCCATGCTAAGCCTATGGCGCCGCTGAGGTGGCGCAACCGGATTGGCCAAATCTTACAGGTCATCAGATGGAACAAGTCTACAGCTGGATCAGGGAGCAGTAAGAATAATAATAAGAGTAATGATGCAGTTAATAAGGTTGTGAGGAGTAATAACAAAGGTTTGATAAGGCCTCCAAAAATAATTAGGACCAAAGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_188289.p1 GENE.S_Transcript_188289~~S_Transcript_188289.p1 ORF type:5prime_partial len:136 (+),score=20.57 S_Transcript_188289:3-410(+)
STSLEDESFISIKFGDNGVASWDKSSSNTVVSKVRLENCSMTWGGQTLVKHSCSGSSDNNNNNSSKSVVGHAKPMAPLRWRNRIGQILQVIRWNKSTAGSGSSKNNNKSNDAVNKVVRSNNKGLIRPPKIIRTKE*

Click here to download the sequence:
Link to NCBI Protein BLAST