Transcript Information: S_Transcript_188292.p1


Annotated TAIR IDAT1G21830.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7661429-7662521 | Reverse length=206
E-Value5.9E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.7891710932236
Replicate 211.300453187995
Replicate 310.908203659203
Condition 2: 8 Hour
Replicate 119.764995903684
Replicate 218.006609880756
Replicate 318.456404633581
Condition 3: 24 Hour
Replicate 112.121246327098
Replicate 212.299263599359
Replicate 311.68826448042


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_188292.p1 GENE.S_Transcript_188292~~S_Transcript_188292.p1 ORF type:3prime_partial len:164 (+),score=29.37,DUF740|PF05340.8|1.3e-06,DUF740|PF05340.8|15 S_Transcript_188292:136-624(+)
ATGAATGAAGTTGATAAAGGAGGGTGTTATTTCCACCCAAAGGAAGTTGTTACTGGGGTTTGTCATATTTGCTTGAATGAAAGGCTCCTCATATTAGCTGCCAAACAAGGCCTTAATAAAGCTTCAAAATCCTCCAAATATTATAATTCTAATTCTAGTAGCCAAAGGAGGACTCTCTCTTATTCAAATCTCTATAAATCCAAGCCCTCCATTTCTCTTCCTAGTAAGATCTTTGCCCTTGGATCCTTCTTTAACCGTAGAGATCATCTTGGCCCACGTCACAGGAAATCTGATCGTTGTGATTTCAATGATTTTGTTGATGATCCTAGCTCTACTTCTACCAGCTTAGAAGATGAATCATTTATATCAATAAAGTTTGGGGACAATGGAGTAGCATCATGGGACAAGAGTAGCAGCAATACTGTAGTTTCAAAGGTGAGACTGGAAAATTGCAGCATGACATGGGGCGGTCAAACCTTGGTCAAACAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_188292.p1 GENE.S_Transcript_188292~~S_Transcript_188292.p1 ORF type:3prime_partial len:164 (+),score=29.37,DUF740|PF05340.8|1.3e-06,DUF740|PF05340.8|15 S_Transcript_188292:136-624(+)
MNEVDKGGCYFHPKEVVTGVCHICLNERLLILAAKQGLNKASKSSKYYNSNSSSQRRTLSYSNLYKSKPSISLPSKIFALGSFFNRRDHLGPRHRKSDRCDFNDFVDDPSSTSTSLEDESFISIKFGDNGVASWDKSSSNTVVSKVRLENCSMTWGGQTLVKH

Click here to download the sequence:
Link to NCBI Protein BLAST