Transcript Information: S_Transcript_18832.p1


Annotated TAIR IDAT3G15390.1
Annotated Gene Namesilencing defective 5
Annotated Gene Symbol(s)SDE5
Annotation TypeHomolog
Chromosome Positionchr3:5196689-5199531 | Reverse length=490
E-Value6E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.32063856909856
Replicate 20
Replicate 31.3332098373687
Condition 2: 8 Hour
Replicate 10.7707972403783
Replicate 20
Replicate 31.2840872051194
Condition 3: 24 Hour
Replicate 10.78957410206967
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18832.p1 GENE.S_Transcript_18832~~S_Transcript_18832.p1 ORF type:5prime_partial len:83 (+),score=20.68 S_Transcript_18832:2-250(+)
GTTGCTAGTTCGAACCAGGACATTGAGAATTTTCTCTTTGAAATGCTTGGACAGGGTTTTCAGCTTGAGAGGAGTGCTATTCGTGAAGTCTTAGGTCATTGTGGATATGACATGAAGATGAGCTTGGAGACACTGCTGGATCTTACAGCTGCAACTCTTGACAGCAGGAACGACTTTCATGTGGTAACATTGTCAACCAAGTCAAAGCAGAACTATGAGAACCAATGGGATCTCGGAAACACAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18832.p1 GENE.S_Transcript_18832~~S_Transcript_18832.p1 ORF type:5prime_partial len:83 (+),score=20.68 S_Transcript_18832:2-250(+)
VASSNQDIENFLFEMLGQGFQLERSAIREVLGHCGYDMKMSLETLLDLTAATLDSRNDFHVVTLSTKSKQNYENQWDLGNTK*

Click here to download the sequence:
Link to NCBI Protein BLAST