Transcript Information: S_Transcript_18834.p1


Annotated TAIR IDAT3G15390.1
Annotated Gene Namesilencing defective 5
Annotated Gene Symbol(s)SDE5
Annotation TypeHomolog
Chromosome Positionchr3:5196689-5199531 | Reverse length=490
E-Value3E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3679580074158
Replicate 21.3402629170453
Replicate 30.77562908762806
Condition 2: 8 Hour
Replicate 13.0891920552856
Replicate 22.718075068378
Replicate 31.3944947031296
Condition 3: 24 Hour
Replicate 12.8582090548441
Replicate 20.84724529257373
Replicate 32.1214803705238


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18834.p1 GENE.S_Transcript_18834~~S_Transcript_18834.p1 ORF type:3prime_partial len:214 (+),score=53.12 S_Transcript_18834:2-640(+)
ATGGAAGCACCTGCATCAAGTAGAGTGCTTGATGATGAAGACAAGGCCTTGAAGAGCCTGCTTGACACATTTGGTTCTGTGTTCTCTCTTCAAGACATAGCTTCTGCTTTTTGCAAGGCAGGACGAGACGCTAGCCTTGCTGGTGAGCTTCTGTGTGGAATGAGAACACACTCACCTGGCGGTACCTTTCATGTATCTAATGGTTTCGTAAATGGTGAAACTTCTTCGAAGTATGATAATGGATTTGGTAAGTCAGGCTACCCAAATGGAAATAGTGACTGTAAAGCAGTAAGATTGAAAAGGAATCCTGTTTCAATGGGTACTGTTTCAAATGTGCTTGGGAAAAATTATGTGTGGCATCCTCAGACAAATATAATTGCCAATGTAACAAAGCCATTGGAAATAGAAGAAAACAAGTCCTCGGGGTCGGTGCATTCTTCTCAAGAGTCCATATCAGAAAAGGGCACTGTTGCTAGTTCGAACCAGGACATTGAGAATTTTCTCTTTGAAATGCTTGGACAGGGTTTTCAGCTTGAGAGGAGTGCTATTCGTGAAGTCTTAGGTCATTGTGGATATGACATGAAGATGAGCTTGGAGACACTGCTGGATCTTACAGCTGCAACTCTTGACAGCAGGAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18834.p1 GENE.S_Transcript_18834~~S_Transcript_18834.p1 ORF type:3prime_partial len:214 (+),score=53.12 S_Transcript_18834:2-640(+)
MEAPASSRVLDDEDKALKSLLDTFGSVFSLQDIASAFCKAGRDASLAGELLCGMRTHSPGGTFHVSNGFVNGETSSKYDNGFGKSGYPNGNSDCKAVRLKRNPVSMGTVSNVLGKNYVWHPQTNIIANVTKPLEIEENKSSGSVHSSQESISEKGTVASSNQDIENFLFEMLGQGFQLERSAIREVLGHCGYDMKMSLETLLDLTAATLDSRN

Click here to download the sequence:
Link to NCBI Protein BLAST