Transcript Information: S_Transcript_18835.p1


Annotated TAIR IDAT3G15390.1
Annotated Gene Namesilencing defective 5
Annotated Gene Symbol(s)SDE5
Annotation TypeHomolog
Chromosome Positionchr3:5196689-5199531 | Reverse length=490
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0894155368633
Replicate 26.7310205429706
Replicate 36.7988052511578
Condition 2: 8 Hour
Replicate 18.5843732208798
Replicate 210.711944475801
Replicate 39.1224602038268
Condition 3: 24 Hour
Replicate 18.6083651043443
Replicate 28.162813491481
Replicate 39.2979570476487


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18835.p1 GENE.S_Transcript_18835~~S_Transcript_18835.p1 ORF type:complete len:236 (+),score=51.20,DUF1771|PF08590.6|3.9e-13 S_Transcript_18835:2726-3433(+)
ATGAGAACCAATGGGATCTCGGAAACACAAAATGAAGAGAGATATGAGCAACAGAAGGAAGTTTTGACAGCACTGTTTCGCGTCCCAGAGAGACCTGAACTAACTATAAGCACCCCTGTTATGAAATCTCTTGGGCGATCCAGAGCGTTTGGGGCAGTTGTGACAGAACCCCTGAAGGACATTGATGAGGACCACAAGACTAAAGTAACAAGTCCTCACCTTGCCAATATGAAAGATGAAGAGGATGAATATGAGATCCTTCGCAAAGCTGTTAGGGAATATCGTGATGCAATGAAGGAATATTACAAAGCTGCTGCAGAAGCATTTGCGAGTGGTGATCGTGCTCGAGCAGGAATATTGCTGGAAAAGGGACAGTTTTTTCACAACAGAGCCTGTGAAACTGATGAAGAATCTGCCCGAAAGATTTTTGAGACCAGTGAAGACGGAGAGATGCAAGATGAAATGTGTCTTGATCTGCAACATCACGATGCCAAAGAGGCAGTACGTCTTGTAAAATGTCATCTTCGTTCGCTCTCTGGCATTGTTGCGATTATGAACCTCAAAATTATCATTGGGAATGGGGAGAAAGATGCTGCAAAACGCAAGCGACTGGTAAGCCTTAAACAACTGCAGCTCTGCATGGAGCACTTTACTGGGCTGTTCGATTTTTTGTGTCCAATTATATTTTCATATTTGATTGGCTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18835.p1 GENE.S_Transcript_18835~~S_Transcript_18835.p1 ORF type:complete len:236 (+),score=51.20,DUF1771|PF08590.6|3.9e-13 S_Transcript_18835:2726-3433(+)
MRTNGISETQNEERYEQQKEVLTALFRVPERPELTISTPVMKSLGRSRAFGAVVTEPLKDIDEDHKTKVTSPHLANMKDEEDEYEILRKAVREYRDAMKEYYKAAAEAFASGDRARAGILLEKGQFFHNRACETDEESARKIFETSEDGEMQDEMCLDLQHHDAKEAVRLVKCHLRSLSGIVAIMNLKIIIGNGEKDAAKRKRLVSLKQLQLCMEHFTGLFDFLCPIIFSYLIGF*

Click here to download the sequence:
Link to NCBI Protein BLAST