Transcript Information: S_Transcript_18836.p1


Annotated TAIR IDAT3G15390.1
Annotated Gene Namesilencing defective 5
Annotated Gene Symbol(s)SDE5
Annotation TypeHomolog
Chromosome Positionchr3:5196689-5199531 | Reverse length=490
E-Value8E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78853336993127
Replicate 20.49028421238922
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.33143479466262
Replicate 30
Condition 3: 24 Hour
Replicate 10.32362790356436
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18836.p1 GENE.S_Transcript_18836~~S_Transcript_18836.p1 ORF type:3prime_partial len:135 (+),score=35.72,DUF1771|PF08590.6|4.1e-09 S_Transcript_18836:180-581(+)
ATGGGAACTATGAGAACCATTGGGATCTCGGAAACACAAAATGAAGAGAGATATGAGCAACAGAAGGAAGTTTTGACAGCACTGTTTCGCGTCCCAGAGAGACCTGAACTAACTATAAGCACCCCTGTTATGAAATCTTCTAGGCGAGCTAGAGCATTTGGGGCAATTGTGACAGAACCCCTGAAGGACATTGATGAGGACCACAAGACTAAAGTAACAAGTCCTCACCTTGCCAATATGAAAGATGAAGAGGATGAATATGAGATCCTTCGCAAAGCTGTTAGGGAATATCGTGATGCAATGAAGGAATATTACAAAGCTGCTGCAGAAGCATTTGCGAGTGGTGATCGTGCTCGAGCAGGAATATTGCTGGAAAAGGGACAGTTTTTTCACAACAGAGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18836.p1 GENE.S_Transcript_18836~~S_Transcript_18836.p1 ORF type:3prime_partial len:135 (+),score=35.72,DUF1771|PF08590.6|4.1e-09 S_Transcript_18836:180-581(+)
MGTMRTIGISETQNEERYEQQKEVLTALFRVPERPELTISTPVMKSSRRARAFGAIVTEPLKDIDEDHKTKVTSPHLANMKDEEDEYEILRKAVREYRDAMKEYYKAAAEAFASGDRARAGILLEKGQFFHNRA

Click here to download the sequence:
Link to NCBI Protein BLAST