Transcript Information: S_Transcript_18838.p1


Annotated TAIR IDAT3G15390.1
Annotated Gene Namesilencing defective 5
Annotated Gene Symbol(s)SDE5
Annotation TypeHomolog
Chromosome Positionchr3:5196689-5199531 | Reverse length=490
E-Value3E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1385447421127
Replicate 21.8713973285392
Replicate 33.3756793724448
Condition 2: 8 Hour
Replicate 11.6184448008538
Replicate 23.6953499985263
Replicate 32.5693209166719
Condition 3: 24 Hour
Replicate 11.9504360259459
Replicate 21.3153104932702
Replicate 32.3645666629796


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18838.p1 GENE.S_Transcript_18838~~S_Transcript_18838.p1 ORF type:3prime_partial len:224 (+),score=49.31 S_Transcript_18838:145-813(+)
ATGGAAGCACCTGCATCAAGTAGAGTGCTTGATGATGAAGACAAGGCCTTGAAGAGCCTGCTTGACACATTTGGTTCTGTGTTCTCTCTTCAAGACATAGCTTCTGCTTTTTGCAAGGCAGGACGAGACGCTAGCCTTGCTGGTGAGCTTCTGTGTGGAATGAGAACACACTCACCTGGCGGTACCTTTCATGTATCTAATGGTTTCGTAAATGGTGAAACTTCTTCGAAGTATGATAATGGATTTGGTAAGTCAAGCTACCCAATTGGAAATAGTGACTGTAAAGCAATAAAATTTAAAAGGAATCCTGTTTCAATGGGTACTGTTTCAAATGTGCTTGGGAAAAATTATGTGTGGCGTCCTCGGACAAATATAATTGCCAATATAACAAAGCCATTGGACATAGAAGAAAACAAGTCGTGGGGCTTGGTGCATTCTTCTCAAGAGTCCATATCAGAAAAGGGCACTGTTGCTAGTTCGAACCAGGACATTGAGAATTTTCTCTTTGAAATGCTTGGACAGGGTTTTCAGCTTGAGAGGAGTGCTATTCGTGAAGTCTTAGGTCATTGTGGATATGACATGAAGATGAGCTTGGAGACACTGCTGGATCTTACAGCTGCAACTCTTGACAGCAGGAACGACTTTCATGTGGTAACATTGTCAACCAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18838.p1 GENE.S_Transcript_18838~~S_Transcript_18838.p1 ORF type:3prime_partial len:224 (+),score=49.31 S_Transcript_18838:145-813(+)
MEAPASSRVLDDEDKALKSLLDTFGSVFSLQDIASAFCKAGRDASLAGELLCGMRTHSPGGTFHVSNGFVNGETSSKYDNGFGKSSYPIGNSDCKAIKFKRNPVSMGTVSNVLGKNYVWRPRTNIIANITKPLDIEENKSWGLVHSSQESISEKGTVASSNQDIENFLFEMLGQGFQLERSAIREVLGHCGYDMKMSLETLLDLTAATLDSRNDFHVVTLSTK

Click here to download the sequence:
Link to NCBI Protein BLAST