Transcript Information: S_Transcript_18840.p1


Annotated TAIR IDAT3G15390.1
Annotated Gene Namesilencing defective 5
Annotated Gene Symbol(s)SDE5
Annotation TypeHomolog
Chromosome Positionchr3:5196689-5199531 | Reverse length=490
E-Value6E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7574623457195
Replicate 23.9546509584225
Replicate 33.8277376777284
Condition 2: 8 Hour
Replicate 11.0059146376006
Replicate 24.854269044469
Replicate 32.0109290193379
Condition 3: 24 Hour
Replicate 15.7703465824211
Replicate 24.703809949808
Replicate 34.5209324877095


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18840.p1 GENE.S_Transcript_18840~~S_Transcript_18840.p1 ORF type:5prime_partial len:106 (+),score=24.85 S_Transcript_18840:2-319(+)
GTTGCTAGTTCGAACCAGGACATTGAGAATTTTCTCTTTGAAATGCTTGGACAGGGTTTTCAGCTTGAGAGGAGTGCTATTCGTGAAGTCTTAGGTCATTGTGGATATGACATGAAGATGAGCTTGGAGACACTGCTGGATCTTACAGCTGCAACTCTTGACAGCAGGAACGACTTTCATGTGGTAACATTGTCAACCAAGGCTGGTAAAATGAATTCAAACTCAGAAACTTTCTCATCTCAGAACCAAGTGCAAAAAGAAAAATTTGCTGAGAGGTCTACTCCTAATCTTCACCTAACCCACTGCCCATGCTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18840.p1 GENE.S_Transcript_18840~~S_Transcript_18840.p1 ORF type:5prime_partial len:106 (+),score=24.85 S_Transcript_18840:2-319(+)
VASSNQDIENFLFEMLGQGFQLERSAIREVLGHCGYDMKMSLETLLDLTAATLDSRNDFHVVTLSTKAGKMNSNSETFSSQNQVQKEKFAERSTPNLHLTHCPCS*

Click here to download the sequence:
Link to NCBI Protein BLAST