Transcript Information: S_Transcript_18842.p1


Annotated TAIR IDAT3G15390.1
Annotated Gene Namesilencing defective 5
Annotated Gene Symbol(s)SDE5
Annotation TypeHomolog
Chromosome Positionchr3:5196689-5199531 | Reverse length=490
E-Value3E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0385561457631
Replicate 22.2600906375991
Replicate 31.2595039276605
Condition 2: 8 Hour
Replicate 13.8489728865069
Replicate 23.6013219761511
Replicate 32.9114328436072
Condition 3: 24 Hour
Replicate 11.9180873308814
Replicate 22.1005483900029
Replicate 32.5837216219875


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18842.p1 GENE.S_Transcript_18842~~S_Transcript_18842.p1 ORF type:complete len:205 (+),score=40.27 S_Transcript_18842:145-759(+)
ATGGAAGCACCTGCATCAAGTAGAGTGCTTGATGATGAAGACAAGGCCTTGAAGAGCCTGCTTGACACATTTGGTTCTGTGTTCTCTCTTCAAGACATAGCTTCTGCTTTTTGCAAGGCAGGACGAGACGCTAGCCTTGCTGGTGAGCTTCTGTGTGGAATGAGAACACACTCACCTGGCGGTACCTTTCATGTATCTAATGGTTTCGTAAATGGTGAAACTTCTTCGAAGTATGATAATGGATTTGGTAAGTCAAGCTACCCAATTGGAAATAGTGACTGTAAAGCAATAAAATTTAAAAGGAATCCTGTTTCAATGGGTACTGTTTCAAATGTGCTTGGGAAAAATTATGTGTGGCGTCCTCGGACAAATATAATTGCCAATATAACAAAGCCATTGGACATAGAAGAAAACAAGTCGTCGGGCTTGCATTCTTCTCAAGAGTCTGTATCAGAAAAGGGCAATGTTGCTAGTTCGAACCAGGACATTGAGAATTTTCTCTTTGAAATGCTTGGACAGGGTTTTCAGCTTGAGAGGAGTGCTATTCGTGAAGTCTTAGGTCATTGTGGATATGACATGAAGATGGTAAGTATCACATATACCTGTTGGTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18842.p1 GENE.S_Transcript_18842~~S_Transcript_18842.p1 ORF type:complete len:205 (+),score=40.27 S_Transcript_18842:145-759(+)
MEAPASSRVLDDEDKALKSLLDTFGSVFSLQDIASAFCKAGRDASLAGELLCGMRTHSPGGTFHVSNGFVNGETSSKYDNGFGKSSYPIGNSDCKAIKFKRNPVSMGTVSNVLGKNYVWRPRTNIIANITKPLDIEENKSSGLHSSQESVSEKGNVASSNQDIENFLFEMLGQGFQLERSAIREVLGHCGYDMKMVSITYTCWL*

Click here to download the sequence:
Link to NCBI Protein BLAST