Transcript Information: S_Transcript_188432.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value9E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23141740204505
Replicate 20.95925171989195
Replicate 30.88204389965046
Condition 2: 8 Hour
Replicate 10.4635954416768
Replicate 20.48634453564623
Replicate 30.27803279484758
Condition 3: 24 Hour
Replicate 10.94977754306931
Replicate 21.4780746680227
Replicate 30.5483053131547


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_188432.p1 GENE.S_Transcript_188432~~S_Transcript_188432.p1 ORF type:5prime_partial len:230 (+),score=32.23,RVT_1|PF00078.23|3.4e-16,RVT_1|PF00078.23|9e+02 S_Transcript_188432:3-692(+)
TCGGTTTCCGCTTCTGTGTTGGTCAATGGGGGAAGGACAGAGGAGTTTCAGCCTTCTAGGGGCCTTAGACAAGGGGACCCCCTCTCCCCCTATATCTTCATTCTTTGTATGGAGTTCTTGTCCAAACTCATCCACAATGCTTGTGAGGACAACACTTGGACCCCCTTCTCCTTCTCCAGATCAGGCTTTGCAATCTCCCACCTTCTGTTTGCAGATGATGTCATTTTGTTTGGAGCAGCTAATCCTAGCACGTTAGAGGCCCTAGATTCCAACCTCCACCTCTTCTGTCAGGCTTCGGGGCAAAAAGTGAATGCCAGTAAAAGCAGCTTGTTCTTTTCTCCCAATACATCCCCTGATATCATCCAATCTTTTGTGGACACCTTGGGCACTAAACCCTCCCAAGATTTAGGAACCTATCTGGGGCTCCCCTTGTCTCCAAAGAGACCCAGTAAGAACCAGCTCCGTGGCATCGTCAGCAAAGTCCAAGATAGATTAGCTACCTGGAAGATCAAATTCTTAACGAGAGCTGGGAGGGTGTGTCTGATCAATGCAACCCTCAATGCCATTCCTAATTACTACATGCACGGAGTGGCCTTCCCTAAAGCCCTTACCAATGAAATGAATCGCACTGTAAATAACTTCCTTTGGGGGGACACTTCTGAGCAGAGAAAGCTCCACCTGGTGGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_188432.p1 GENE.S_Transcript_188432~~S_Transcript_188432.p1 ORF type:5prime_partial len:230 (+),score=32.23,RVT_1|PF00078.23|3.4e-16,RVT_1|PF00078.23|9e+02 S_Transcript_188432:3-692(+)
SVSASVLVNGGRTEEFQPSRGLRQGDPLSPYIFILCMEFLSKLIHNACEDNTWTPFSFSRSGFAISHLLFADDVILFGAANPSTLEALDSNLHLFCQASGQKVNASKSSLFFSPNTSPDIIQSFVDTLGTKPSQDLGTYLGLPLSPKRPSKNQLRGIVSKVQDRLATWKIKFLTRAGRVCLINATLNAIPNYYMHGVAFPKALTNEMNRTVNNFLWGDTSEQRKLHLVG*

Click here to download the sequence:
Link to NCBI Protein BLAST