Transcript Information: S_Transcript_188433.p2


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7239191083518
Replicate 21.4291685543329
Replicate 31.7173397972583
Condition 2: 8 Hour
Replicate 12.0721027028793
Replicate 21.1774657178804
Replicate 30.69039182526255
Condition 3: 24 Hour
Replicate 11.1497307100313
Replicate 21.3763448325717
Replicate 31.0211354010169


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_188433.p2 GENE.S_Transcript_188433~~S_Transcript_188433.p2 ORF type:5prime_partial len:247 (+),score=28.61,RVT_1|PF00078.23|5.5e-17,RVT_1|PF00078.23|1.1e+03 S_Transcript_188433:3-743(+)
TCGGTTTCCGCTTCTGTGTTGGTCAATGGGGGAAGGACAGAGGAGTTTCAGCCTTCTAGGGGCCTTAGACAAGGGGACCCCCTCTCCCCCTATATCTTCATTCTTTGTATGGAGTTCTTGTCTAAACTCATCCACAATGCATGTGAGGACAAGACTTGGACCCCCTTCTCTTTCTCTAGATCGGGCTTTGCAATCTCCCACCTTCTGTTTGTTGATGATGTCATTTTGTTTGGAGAAGCTAATCCTAGCACTTTAGAGGCCCTAGTTTCCACCCTCCACCTCTTTTGTCAGGCTTCGAGGCAAAAAGTGAATGCTAGCAAAAGTAGGTTGTTCTTCTCCCCCAATACATCCTCTGATATTATCCAATCCTTTGTGGACACTCTGGGCACTAAACCCTCCCAAGATTTAGGAACCTATCTGGGGCTCCCCTTGTCTCCAAAGAGACCCAGTAAGAACCAGCTTCGTAGCATAGTCAGCAAAGTCCAGGATAGATTAGCTTCCTGGAAGACCAAATTCTTAACGAGAGCTGGGAGGGTGTGTCTAATCAATGTAACCCTCAATGCCATTCCTAACTATTACATGCACGGAGTGGCCTTTCCCAAAGGCCTTACCAAAGAAATGAATCGCACTGTAAATAACTTCCTTTGGGGGGATACTCATGAGCAGAGAAAGCTCCACTTGGTGGGTTGGGACAATGTCACCAACCTTAAAAGCATGGGGGGCTGGGTATTAGGGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_188433.p2 GENE.S_Transcript_188433~~S_Transcript_188433.p2 ORF type:5prime_partial len:247 (+),score=28.61,RVT_1|PF00078.23|5.5e-17,RVT_1|PF00078.23|1.1e+03 S_Transcript_188433:3-743(+)
SVSASVLVNGGRTEEFQPSRGLRQGDPLSPYIFILCMEFLSKLIHNACEDKTWTPFSFSRSGFAISHLLFVDDVILFGEANPSTLEALVSTLHLFCQASRQKVNASKSRLFFSPNTSSDIIQSFVDTLGTKPSQDLGTYLGLPLSPKRPSKNQLRSIVSKVQDRLASWKTKFLTRAGRVCLINVTLNAIPNYYMHGVAFPKGLTKEMNRTVNNFLWGDTHEQRKLHLVGWDNVTNLKSMGGWVLGI*

Click here to download the sequence:
Link to NCBI Protein BLAST