Transcript Information: S_Transcript_188482.p1


Annotated TAIR IDAT1G74350.1
Annotated Gene NameIntron maturase, type II family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27949022-27951283 | Reverse length=753
E-Value1.5E-297
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0471539411677
Replicate 22.5191887114951
Replicate 32.7486770124597
Condition 2: 8 Hour
Replicate 12.358096044683
Replicate 22.5275886684307
Replicate 32.4339008683573
Condition 3: 24 Hour
Replicate 12.7043545667442
Replicate 22.2881732841505
Replicate 32.0007871763674


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_188482.p1 GENE.S_Transcript_188482~~S_Transcript_188482.p1 ORF type:complete len:832 (+),score=149.01,RVT_1|PF00078.23|4.2e-09,Intron_maturas2|PF01348.17|7.6e-09 S_Transcript_188482:142-2637(+)
ATGTGGCTCTCAAATGTTCCCAAACGTACCTTCATCCTTGCATTTGGTAACTTCCCACTTACAAACATGTTTTCCACAACTACCCCTTTTCCTGCCACTCCAAGAATTTACATAGGTAAAGCTCAAACATCTTCTTTAGCTTGTTGTTATTCAACCCTTCAAAGGACCAACCATGAGAATGTGAATGCGAATGACAGTAATGTGGATGATGATAATGTTGATTATGATGATGGGAAAGTTCCGTTAGCGAAGAGCTTAGCATCACTTGTAGTTGAGTCTTCATCTTATAAAGATGACTATGTTAAGGAGGGTAGTAAGCTTCAAACTAGTAGAGTTGCTATGAAAAGGGTGCTTGGAGCACGAGTGAAGAAGAGGGTGAAGTTTCAATATGCAAATGGGAAGTTCTGCGATCTTTTGCAAAAGGTTGTTGCTGATCCTAAGACACTTATGGATGCTTATAATTGTATTAGAGTGGACTCAAATGTCGACATAAAATCGTCTTCTGAGATTGAGGGTGTTTGTCTAGACTCCTTGGTGGAAGAGCTTGTTGAGGGGACGTTTGATGTGAAGGCTAATATTTTCTCTGTCTCAACAAAGGGTCGTGCTCCAAAAGAAGTCCTTGTACTTCCTAACCTGAAATTGAAGATCGTTCAAGAAGCTATAAGGATGGTTTTGGAGGTTGTCTTTAGGCCTCACTTCTCGAAAATTTCTCATGGTGGTCGAAGTGGAAGAGGGCGTTTATCTGCTTGCAAGTATATATGCAAAGAGGTCTCTGATCCCAATTGGTGGTTCACTGTGCTTGTAAACAAGAAGATTGATGCCAGAGTTATCGCTAAACTGATTGCTGCCATAGAGGATAAGATTCAGGATCCTCAATTATGTGCGATGATTGAAAGCATGTGTAGTGAGCAGGTGCTCAATCTAGAATTTGGGGGCTTCCCAAAAGGCCAGGGCCTCCCACAAGAAGGTGTTTTATCGCCTATATTGATGAATATTTATCTTGACCACTTTGACAAAGAGTTCCATAAAATATCGATGAGATATGAGGCCCTTGGTTCACACAGTGAGCCTGATGAATGCCGGTCTCAATCACAGCTGCGGAACTGGTTCAGGAGGCAAATAAACGGTAGTGCTGATAACTCCACGGGTTGTGAGATTCATGGTTTGAGAGTTTATTCTTGTCGCTTCATGGATGAGATATTTTTTGCTGTTACTGGTTCCAAAGAGGCTGCACTTTCATTAAAGACTGAGGTTCAATGTTACTTGCAAGATTCTCTTCATTTGCATGTTGACTGCGACACGGAGATCATACCATGTAATAGCCAACATCCCGTCCGTTTTGCTGGTGCGTTAATTGTGAGAACCATTAGAGATACTATGGCAGTAAGAACTGTTCACAAGTTGAAGGACAAGGTCAAGTTATTTGCCTTACAAAAGCAAGGAATTTGGGATGCTGGGACAGCTAGTATAGGTAAGAAGTGGTTAGCTCATGGTTTACGGAAGGTTAAGGAGTCAGAGATAAGACATCTAGCTGATAATAACCCTCTTTTGAGCAAAATCTCCCACTATCGTAAAACTGGCATGGAAACAGATCACTGGTACAAGCACTTACTGAAGATATGGATGCAGGATGTAAATGCTAATTCTGCAAGCAATGAAGAATTTATCCTCTCTAGGTTCATTGCTGAACCTGCACTTCCACAAAGTTTACGGGACTCATATTATGAGTTTCAGAGACATGCAGAAGAATACACTTCTTCTGAGTCGGAATCTCTTCTTTCTCTTTTGCCAAGCTCTGGGATGCCTCCGAAACTTCAGACTGTCACAAAGGTTGTAGCTCCTGTTAATGTTGTAAAGAAGCGCCTTGTGCGTTATGGATTGGTCAATCATGAAGGTTGTGCCCGTGCAGTTTCTGTTCTCATTTTTCAGGATAGCAGCCAGATCATTGACTGGTTTTCTGGCATTGTACATAGATGGCTGCGATGGTATAGTGACTGTCATAACTTCGATGAGCTAAAACTCCTTGTTTCAGATCAAGTCAGGAAGTCTTGCATCTGTACTCTTGCATTAAAGTATAGGATTCATGAGTTTGAGATTGAGAAACGTTTTGAGTCAGAGCTAAGCAAGATCCCTTGTTCCCTGGACATAGTGCATGAAATTGACAAAGAGACACTGGGTTCTTGTGGTCATGATAAAGATGAGGGAATGATGTATGGAATATCATACAATGGGTTGTGTCAACTGTCCCTTGCTAGGATTGTGAGCCAGTCGAGGCCCTGTAATTGTTTTGTTCTGGGCTGCTCAACTCCAGCACCATGTGTTTACACCCTTCATTTGATGGAACGACAGAAGTTTCCGGGTTGGAACACAGGTTTCTCAAGTTGCGTCCATCCTGGTTTGAATAGAAGACGAATTGGCTTGTGTAAACAGCATCTGAAGGACCTCTATCTTGGCGAGATATCACTTCAATCTATAGATTTTGATTCCTGGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_188482.p1 GENE.S_Transcript_188482~~S_Transcript_188482.p1 ORF type:complete len:832 (+),score=149.01,RVT_1|PF00078.23|4.2e-09,Intron_maturas2|PF01348.17|7.6e-09 S_Transcript_188482:142-2637(+)
MWLSNVPKRTFILAFGNFPLTNMFSTTTPFPATPRIYIGKAQTSSLACCYSTLQRTNHENVNANDSNVDDDNVDYDDGKVPLAKSLASLVVESSSYKDDYVKEGSKLQTSRVAMKRVLGARVKKRVKFQYANGKFCDLLQKVVADPKTLMDAYNCIRVDSNVDIKSSSEIEGVCLDSLVEELVEGTFDVKANIFSVSTKGRAPKEVLVLPNLKLKIVQEAIRMVLEVVFRPHFSKISHGGRSGRGRLSACKYICKEVSDPNWWFTVLVNKKIDARVIAKLIAAIEDKIQDPQLCAMIESMCSEQVLNLEFGGFPKGQGLPQEGVLSPILMNIYLDHFDKEFHKISMRYEALGSHSEPDECRSQSQLRNWFRRQINGSADNSTGCEIHGLRVYSCRFMDEIFFAVTGSKEAALSLKTEVQCYLQDSLHLHVDCDTEIIPCNSQHPVRFAGALIVRTIRDTMAVRTVHKLKDKVKLFALQKQGIWDAGTASIGKKWLAHGLRKVKESEIRHLADNNPLLSKISHYRKTGMETDHWYKHLLKIWMQDVNANSASNEEFILSRFIAEPALPQSLRDSYYEFQRHAEEYTSSESESLLSLLPSSGMPPKLQTVTKVVAPVNVVKKRLVRYGLVNHEGCARAVSVLIFQDSSQIIDWFSGIVHRWLRWYSDCHNFDELKLLVSDQVRKSCICTLALKYRIHEFEIEKRFESELSKIPCSLDIVHEIDKETLGSCGHDKDEGMMYGISYNGLCQLSLARIVSQSRPCNCFVLGCSTPAPCVYTLHLMERQKFPGWNTGFSSCVHPGLNRRRIGLCKQHLKDLYLGEISLQSIDFDSWK*

Click here to download the sequence:
Link to NCBI Protein BLAST