Transcript Information: S_Transcript_188593.p1


Annotated TAIR IDAT3G20250.1
Annotated Gene Namepumilio 5
Annotated Gene Symbol(s)APUM5, PUM5
Annotation TypeHomolog
Chromosome Positionchr3:7059098-7062660 | Reverse length=961
E-Value4E-161
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3735118158466
Replicate 22.0660806274596
Replicate 31.2130673678177
Condition 2: 8 Hour
Replicate 12.7577985248466
Replicate 22.2696078330157
Replicate 33.3031246567362
Condition 3: 24 Hour
Replicate 12.0456747081493
Replicate 21.8697012894646
Replicate 31.4621475017459


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_188593.p1 GENE.S_Transcript_188593~~S_Transcript_188593.p1 ORF type:3prime_partial len:897 (+),score=199.81,PUF|PF00806.15|1.8e-06,PUF|PF00806.15|8.5e-07,PUF|PF00806.15|1.6e-05,PUF|PF00806.15|7.7e-05,PUF|PF00806.15|2.9e-08,PUF|PF00806.15|5.2e-06,PUF|PF00806.15|1e-06,PUF|PF00806.15|7.9e-05 S_Transcript_188593:324-3011(+)
ATGGCAACTGAGAATCCCATTAGGATGTTAGAGGATGATGGGTCCAAAAAGTGGCCATCCACTGTGGATCCTGCAATTATTGCATCGGCTTTCAGTAATATTGCTGGTTGTGAAGGCTTTGCAAAAGTTTTAAATGAATGTAATGTCCTAAGAGAACAAACTCGTGCAGTACCTAATAGAAGTGGTAGTGCTCCACCAACTATCGAGGGCTCTATCGCTTCCCTTCAGGCTTTTATAGATCAGAAGAACTCAACATTGACTGATCCTAGCAGTGAGCTTTTGGATGGTGAGTCTGAGGAACAATTGAGGATGGACCCTGGATACATTGCATATTACTATGCCAATGTTAACTTAAACCCAAGGCTTCCTCCTCCTATTCTCTCACGTGAAAACCGTCATTTGGTGCGACTTATGGGTCATTTTGGAAGCAAAATGTTGACTTCGGAAAAGGAAGCTTTTCTGTCTCCACATACGGAGGAACCTGAAGAAGATATGTCTGCTGAACAAAGCTCGGGTGATCAGCTGAAAAGGTCTGTGACTGAACAAAAGAAGGCGTCTTCAGCTTTTCATAGTAGAGGTCAGGTTGATCTCAAGCAGGGAGAATTCCCTGAGGTTCCATCTCCTGCACCTGCTAAATTTGTCGAAGGAGAATTTGGTCATGACAGTCGCACAATTTCAACTGATCAGGATGCATCATGCTCAGGCGCTGTTGTGCCTGAGGATGCTATTACTGTTAATTATAATGGCGTTGCTTCTGTCTCTTGTAATGAGTCTCCTGCAATCACTTTAGAGGATAATGCATCTACCCAGAGTAATTTCGGATCAGATATCTCTGTAGTAGAGTCAAGAATGAAATCCTTGAATGTGTCTGGTGGTTTAGTCATGGAGGATCACCAAAGGAGACATGAGAATGTCAACTCAAGTGATAAGAATAGGCTTCCTTGTCACCCTTTACAAAGGACAATGAATCAGGTTCCTGGATTTCAAGGTCATGTTATTCACCAAGGAATGCCTGGTTTACAGGATGTACAGCCATTCTTGCATAACCCAGGACCAGCACCAGCACCACCACTGTATGCAGCAACAGCCGCCTTTTTGAATTCAGGGTGTCCTTTGTACCCAGGTCTAAAGCCACCAGGTTTCTTTCATCCACGATTTAGTGGATTTAGTCCTAGTTCTGTTTTTCATCCTGCATATTATGGTGGGTATCCTCCAAATAGTGCATTTCCAGTGCCAATTGATGCTTATTCTGCATTGGGCTTTTCAAAGCAACCTATAGAGGCAACAAGTGAAATAAATCCCTATACAAGTCAAAGACTGTTGCGACCTTCTTTTAGTGGTCCTCTTCAAGGACAATTCTTGCAGCAACCCTTTGACAATGCAAGGAGGAGCATGGTCCATGGTCAATTGACTGGTAGAGATGGAGCTCAAGGCCAAATTGATGTTCGTGCACCACGAAAGGATTCTGATACATTTTTCTTGATAAGTGATAAAGATCTGTGTCATCCTGCCCCTGGAAATTTGAGCATTTCTGCTCAGGCAACTGAGAGCCGTGTAAATTACTATGGGCATCCTCCTACATTAGGCATCTCACATTTTCCTGCTCCTTGCCCTGTACTTTTACCTGTATCTCCAATGGCAGAAAGTAATCATCCTGGACCGGGAAATGACCTGATTGCTTCACAAAATTCTCCTAAAAATGTTGTTGCGTGTTCTGTGGGATCAGGACATAGAGGATCTGACAGTTCTGATGATTCCAAAAGGAATTCTTTTCTTGAATTGCTCAAGTCATGCAATTCCAGGAAGCTTGAATTGTCTGATATTTCAGGGCAGATTGTTGAGTTCAGCACTGATCAACATGGTAGTCGGTTCATTCAACAGAAGCTGGAATATTGCAGCATTGATGAGAAGGAATCTGTTTTTAGAGAGGTTTTTCCTCATGCTTCAAAATTAATGATTGATGTATTTGGGAATTATGTAATTCAAAAGTTCTTTGAACACGGAACTGCTGAACATAGGAAAAAGCTTGGTGAACAACTTACTGGACAGATAGTGACCTTAAGTTTGCAAATGTATGGCTGCCGTGTGATCCAAAAGGCCCTTGATGTGATTGAGCTTAATCAGAAAGTAAAGCTTGTGCAAGAGCTTCATGGTCATGTTATGAGATGTGTGTACGACCAGAATGGAAATCACGTGATACAAAAATGTATCGAATCTGTTCCCATAGAGAACATTGGGTTCATTATTTCTTCTTTTATTGGTGAAGTTGCGACACTATCTTCTCATCCCTATGGTTGTCGTGTCATTCAGAGAGTTCTGGAGCATTGTTCAGATGAGCAGATAATTCTGCGAATAATTGATGAGATCCTTGAATCTGCTTGTAGTCTTGCTCAAGATCCATATGGAAATTATGTTACGCAGCATGTGCTTGAGACGGGGAAGGCCCAGCAAAGAAGCCAAATTATCAGCAAGTTGGTTGGTAGATTTGTACAGTTGAGTCAGCATAAGTTTGCATCAAATGTAGTCGAGAAATGCTTGAAATACGGTGATGCTTCAGAGCGAAATCTCATAATCGAAGAAATGGTTGTTCAGTCTGACAATGTTTTGTTGATGATGATGAAGGACCAATTTGCAAATTATGTACTCCAGAAGATCTTCGACATAGGCAGCGATAAACAGAGGGGCATA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_188593.p1 GENE.S_Transcript_188593~~S_Transcript_188593.p1 ORF type:3prime_partial len:897 (+),score=199.81,PUF|PF00806.15|1.8e-06,PUF|PF00806.15|8.5e-07,PUF|PF00806.15|1.6e-05,PUF|PF00806.15|7.7e-05,PUF|PF00806.15|2.9e-08,PUF|PF00806.15|5.2e-06,PUF|PF00806.15|1e-06,PUF|PF00806.15|7.9e-05 S_Transcript_188593:324-3011(+)
MATENPIRMLEDDGSKKWPSTVDPAIIASAFSNIAGCEGFAKVLNECNVLREQTRAVPNRSGSAPPTIEGSIASLQAFIDQKNSTLTDPSSELLDGESEEQLRMDPGYIAYYYANVNLNPRLPPPILSRENRHLVRLMGHFGSKMLTSEKEAFLSPHTEEPEEDMSAEQSSGDQLKRSVTEQKKASSAFHSRGQVDLKQGEFPEVPSPAPAKFVEGEFGHDSRTISTDQDASCSGAVVPEDAITVNYNGVASVSCNESPAITLEDNASTQSNFGSDISVVESRMKSLNVSGGLVMEDHQRRHENVNSSDKNRLPCHPLQRTMNQVPGFQGHVIHQGMPGLQDVQPFLHNPGPAPAPPLYAATAAFLNSGCPLYPGLKPPGFFHPRFSGFSPSSVFHPAYYGGYPPNSAFPVPIDAYSALGFSKQPIEATSEINPYTSQRLLRPSFSGPLQGQFLQQPFDNARRSMVHGQLTGRDGAQGQIDVRAPRKDSDTFFLISDKDLCHPAPGNLSISAQATESRVNYYGHPPTLGISHFPAPCPVLLPVSPMAESNHPGPGNDLIASQNSPKNVVACSVGSGHRGSDSSDDSKRNSFLELLKSCNSRKLELSDISGQIVEFSTDQHGSRFIQQKLEYCSIDEKESVFREVFPHASKLMIDVFGNYVIQKFFEHGTAEHRKKLGEQLTGQIVTLSLQMYGCRVIQKALDVIELNQKVKLVQELHGHVMRCVYDQNGNHVIQKCIESVPIENIGFIISSFIGEVATLSSHPYGCRVIQRVLEHCSDEQIILRIIDEILESACSLAQDPYGNYVTQHVLETGKAQQRSQIISKLVGRFVQLSQHKFASNVVEKCLKYGDASERNLIIEEMVVQSDNVLLMMMKDQFANYVLQKIFDIGSDKQRGI

Click here to download the sequence:
Link to NCBI Protein BLAST