Transcript Information: S_Transcript_18863.p1


Annotated TAIR IDAT3G55460.1
Annotated Gene NameSC35-like splicing factor 30
Annotated Gene Symbol(s)SCL30, At-SCL30
Annotation TypeOrtholog
Chromosome Positionchr3:20561024-20563502 | Forward length=262
E-Value2.2E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.034168153458
Replicate 236.873458473439
Replicate 333.897065857358
Condition 2: 8 Hour
Replicate 141.071122092256
Replicate 239.04716174619
Replicate 340.460636657604
Condition 3: 24 Hour
Replicate 137.419476349629
Replicate 239.032119937043
Replicate 337.132454263088


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18863.p1 GENE.S_Transcript_18863~~S_Transcript_18863.p1 ORF type:3prime_partial len:216 (+),score=39.86,RRM_1|PF00076.18|7.3e-18,RRM_6|PF14259.2|6e-14,RRM_5|PF13893.2|5e-07 S_Transcript_18863:129-773(+)
ATGAGGAGGTACAGTCCAGGGTACTACAGTCCTCCACGTAGAGGATACGGTGGCCGAGGAAGAAGCCCACCACGTGGTGGATATAGTCCTCCCCCAAGAAGGGGTTACAGTCCTCCCCCAAGAAGGGGTTATAGTCCTCCCCCAAGAAGGGGATATGGTGGAGGCGGCGGCGGCGGTTATGGAAGACGTAAGGAGCCTAATCACGGAAGCTTGTTGGTCCGTAACATTCCTCTCGACTGCAGGCCAGAAGAGCTTCGAGTTCCCTTTGAAAGGTTTGGGCTTGTTCGTGATGTCTATATCCCGAAGGATTATTACACAGGGGAACCTCGTGGATTTGCTTTTGTGCAGTTTGTGGACCCTTATGATGCTTCAGAGGCTCAATATCACCTGAATGGGCAGATATTTGCTGGAAGAGAGATAAGTGTAGTTGTTGCTGCTGAGTCAAGGAAAAGGCCTGAAGAGATGCGCCGGAAAACCAGGCAGAGAAGTGGGCCAAGATACAGCACACGACGGTCACCTTTTTACAGGCACTCACGTTCCCGTTCAGCTTCACGCTCACGCTCTCCCCGCTACCATTCTGGTTCCAGAGGGGGTCATCGCTCTAGGTCCTATTCCATCTCTCCTAAAAGACGTGAGGAGTATTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18863.p1 GENE.S_Transcript_18863~~S_Transcript_18863.p1 ORF type:3prime_partial len:216 (+),score=39.86,RRM_1|PF00076.18|7.3e-18,RRM_6|PF14259.2|6e-14,RRM_5|PF13893.2|5e-07 S_Transcript_18863:129-773(+)
MRRYSPGYYSPPRRGYGGRGRSPPRGGYSPPPRRGYSPPPRRGYSPPPRRGYGGGGGGGYGRRKEPNHGSLLVRNIPLDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVQFVDPYDASEAQYHLNGQIFAGREISVVVAAESRKRPEEMRRKTRQRSGPRYSTRRSPFYRHSRSRSASRSRSPRYHSGSRGGHRSRSYSISPKRREEYS

Click here to download the sequence:
Link to NCBI Protein BLAST