Transcript Information: S_Transcript_18865.p1


Annotated TAIR IDAT3G55460.1
Annotated Gene NameSC35-like splicing factor 30
Annotated Gene Symbol(s)SCL30, At-SCL30
Annotation TypeHomolog
Chromosome Positionchr3:20561024-20563502 | Forward length=262
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 167.12831654844
Replicate 255.870447187935
Replicate 357.713835803904
Condition 2: 8 Hour
Replicate 163.127399197483
Replicate 267.11554591918
Replicate 367.76530656509
Condition 3: 24 Hour
Replicate 161.404772000924
Replicate 262.804691781221
Replicate 354.208573049802


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18865.p1 GENE.S_Transcript_18865~~S_Transcript_18865.p1 ORF type:complete len:201 (+),score=37.80,RRM_1|PF00076.18|8.9e-07,RRM_5|PF13893.2|5.7e-06 S_Transcript_18865:1088-1690(+)
ATGAAGTACATATGTCCATCATCATGCAGGGAACCTCGTGGATTTGCTTTTGTGCAGTTTGTGGACCCTTATGATGCTTCAGAGGCTCAATATCACCTGAATGGGCAGATATTTGCTGGAAGAGAGATAAGTGTAGTTGTTGCTGCTGAGTCAAGGAAAAGGCCTGAAGAGATGCGCCGGAAAACCAGGCAGAGAAGTGGGCCAAGATACAGCACACGACGGTCACCTTTTTACAGGCACTCACGTTCCCGTTCAGCTTCACGCTCACGCTCTCCCCGCTACCATTCTGGTTCCAGAGGGGGTCATCGCTCTAGGTCCTATTCCATCTCTCCTAAAAGACGTGAGGAGTATTCTGTGTCACCAAGTAGAAGACCTGTCAGTCGATCTAGATCTCCCAGGGATTCTCCACGTGGTGGAGATGGCCGCAGATCATACTCACCTTATCATTATGGTCAGAATGAACCTGAAAATGGGTATGACAAGAAACCCAAGTACGAAGCTGATGACACACGAGGTCGGAGTGAGTCTCCTAGGCGATTGTCAAGATCTCCATCTGGATCCAGATCTCGATCTGCTGATGTTTCACCAGCACGAAGTAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18865.p1 GENE.S_Transcript_18865~~S_Transcript_18865.p1 ORF type:complete len:201 (+),score=37.80,RRM_1|PF00076.18|8.9e-07,RRM_5|PF13893.2|5.7e-06 S_Transcript_18865:1088-1690(+)
MKYICPSSCREPRGFAFVQFVDPYDASEAQYHLNGQIFAGREISVVVAAESRKRPEEMRRKTRQRSGPRYSTRRSPFYRHSRSRSASRSRSPRYHSGSRGGHRSRSYSISPKRREEYSVSPSRRPVSRSRSPRDSPRGGDGRRSYSPYHYGQNEPENGYDKKPKYEADDTRGRSESPRRLSRSPSGSRSRSADVSPARSR*

Click here to download the sequence:
Link to NCBI Protein BLAST