Transcript Information: S_Transcript_188847.p1


Annotated TAIR IDAT1G50590.1
Annotated Gene NameRmlC-like cupins superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18732378-18734053 | Reverse length=310
E-Value3.2E-141
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.615954120325
Replicate 213.413589664536
Replicate 311.212693366441
Condition 2: 8 Hour
Replicate 18.430968264913
Replicate 26.5406069112822
Replicate 38.6396458731154
Condition 3: 24 Hour
Replicate 110.886154563419
Replicate 218.899058822801
Replicate 311.060830104569


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_188847.p1 GENE.S_Transcript_188847~~S_Transcript_188847.p1 ORF type:complete len:301 (+),score=65.38,Pirin_C|PF05726.9|1.5e+02,Pirin_C|PF05726.9|1.2e+03,Pirin_C|PF05726.9|1.7e-33,Pirin|PF02678.12|4.1e-31,Cupin_2|PF07883.7|0.066,Cupin_2|PF07883.7|0.64 S_Transcript_188847:111-1013(+)
ATGACAGAAATTGAGTTCTCAAATTCCGGTTTCAATAACCCACGTCCTGTTGTGAGGAAATTCCAAGCCAGGCCTCAGCGTGAAGGTGTTGGTGCTGTTGTCAGAAGAAGCATTGGCAGGTTTGAGCTCAAGTACTTTGATCCTTTCCTTGCTTTGGATGAATTCTCAGTTGCTGCTCCAGCTGGATTTCCTGATCATCCACATAGAGGATTTGAGACAGTGACCTACATGCTGCAGGGAGCTGTGACACATGAAGATTTTGCCGGGCATAAAGGAACAATAGGTGCTGGTGACTTGCAATGGATGACTGCTGGAAGAGGAATAGTTCACTCGGAAATGCCTGCTGCACAAGGTGTCCAAAAGGGCTTGCAACTTTGGATCAACCTCTCCTCTAAACATAAAATGATTGAACCAAGATACCAAGAAATACTAAGCAAGGATATAGCTGAAGTCCAAAAAAATGGAATCCATGTTCGAGTTATAGCGGGGGAAGCTTTAGGCGCTAAATCACCTATCTATACTAGAACACCATCTTTATATTTAGACTTTACTTTAAAACCAGGCGCAAATCTTCAGCAACCAATTCCAAAATCATGGAATGCTTTTGTTTATGTCTTGGAAGGTGAGGGCATTTTCGGGAGCACGAAATCTTCACCAACATCTGCACATCACTTGCTTCTTTTAGGAGCAGGTGATGGATTAACAGCTTGGAACAAGTCGTCCAAGCCTCTTAGGTTCATTTTAGTAGGTGGCAAGCCATTGGGTGAGCCTTTGGTGCAGTTGGGACCTTTTGTGATGAATACTCAAGATGAGATTGATCAAACAATAGATGATTTTGAGAATTGTGTCAATGGGTTTGAGAGAGCAAAATATTGGCGATCTTCCGCCATAGTTGAGTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_188847.p1 GENE.S_Transcript_188847~~S_Transcript_188847.p1 ORF type:complete len:301 (+),score=65.38,Pirin_C|PF05726.9|1.5e+02,Pirin_C|PF05726.9|1.2e+03,Pirin_C|PF05726.9|1.7e-33,Pirin|PF02678.12|4.1e-31,Cupin_2|PF07883.7|0.066,Cupin_2|PF07883.7|0.64 S_Transcript_188847:111-1013(+)
MTEIEFSNSGFNNPRPVVRKFQARPQREGVGAVVRRSIGRFELKYFDPFLALDEFSVAAPAGFPDHPHRGFETVTYMLQGAVTHEDFAGHKGTIGAGDLQWMTAGRGIVHSEMPAAQGVQKGLQLWINLSSKHKMIEPRYQEILSKDIAEVQKNGIHVRVIAGEALGAKSPIYTRTPSLYLDFTLKPGANLQQPIPKSWNAFVYVLEGEGIFGSTKSSPTSAHHLLLLGAGDGLTAWNKSSKPLRFILVGGKPLGEPLVQLGPFVMNTQDEIDQTIDDFENCVNGFERAKYWRSSAIVES*

Click here to download the sequence:
Link to NCBI Protein BLAST