Transcript Information: S_Transcript_188928.p1


Annotated TAIR IDAT2G02750.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:771641-773482 | Reverse length=613
E-Value5.4E-165
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.79441794731882
Replicate 20.94084390437163
Replicate 30.78647062190194
Condition 2: 8 Hour
Replicate 12.5008453463589
Replicate 22.385058490376
Replicate 33.2269193602424
Condition 3: 24 Hour
Replicate 10.74524122782411
Replicate 20.77317907296707
Replicate 31.1831236181504


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_188928.p1 GENE.S_Transcript_188928~~S_Transcript_188928.p1 ORF type:3prime_partial len:469 (+),score=74.09,PPR_2|PF13041.2|0.00049,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|0.021,PPR_2|PF13041.2|9.1e+03,PPR_2|PF13041.2|0.00018,PPR_2|PF13041.2|0.75,PPR_2|PF13041.2|7e-06,PPR_2|PF13041.2|2.4e-10,PPR_2|PF13041.2|0.069,PPR_2|PF13041.2|7.5e-05,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|14,PPR|PF01535.16|0.35,PPR|PF01535.16|4.1e+02,PPR|PF01535.16|0.13,PPR|PF01535.16|0.011,PPR|PF01535.16|0.00033,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|0.059,PPR|PF01535.16|9.4e-08,PPR_1|PF12854.3|5.9e+03,PPR_1|PF12854.3|5,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|6e+03,PPR_1|PF12854.3|19,PPR_1|PF12854.3|13,PPR_1|PF12854.3|0.041,PPR_1|PF12854.3|4.6e-06,PPR_1|PF12854.3|0.48,PPR_1|PF12854.3|0.003,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|25,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|34,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|9.5,PPR_3|PF13812.2|11,PPR_3|PF13812.2|0.47,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|0.0024 S_Transcript_188928:125-1528(+)
ATGAGGCGTGAAATTGCAAAGTTAGTCTCAAATGGGCACTTTGGAGAAGCTATATTATTGTATTCCAAACTTCATTCTTCCTCTATACCACCCAACAAATTCACATTCCCATTTCTTTTCAAAGCCTGTGCTAAGCTCAAGTCACATATCCAAGGCCATATCTTTCATACCCATCTCATCAAATCCGGGTTTAACCATGATACGTACGCCGCAACTGCTCTCACTAGCATGTACATGGAATTTCAAGAAATACACAATGCCGTCCAGGTGTTCGACGAAATGCCTCAACGAAATGAGGCGTCTGTCAACGCCACCATTTCTGGGTTCTCTCAGAATGGGTTTCTTAGAGAAGCTCTTGTGGCTTTTAGGGATGTTGGGGTCAGTAGGTTTCGACCCAATTCGGTTATGATTGCCAGTGTGTTATCAGCTTGTGATGTTGTTGAGCATGGTGGTCAGGTTCATTGTTGGGCAGTGAAGATTGGTGTTGAGAGGGATGTTTATGTTGGGACTGGCATTGTGACAATGTATATGATTTGCTCGGATTCGGTGTCGGCGACTAAGGTGTTTGGAATGATGGAATGCAAGAATGTGGTTAGTTACAATGCTTTTATGTCAGGATTAGTTCAGAATGGTGTTTATCGGGTTGTTTCGAACGTGTTTAAGGATTTGTTGAGGTCTTCTAGTGGAGTGCTTAACTCGGTTACATTGGTTTCGGTTTTGGGTGCTTGTTCCAATGTGCAGAATCTACAATTTGGAAGGCAAGCTCATGGTGTTGGTGTGAAAGTTGGGTTACAATCAGACACTATGTTGGGAACTGCACTAGTGGATTTGTATGCAAAATGTGGTTGTTCTCATTTAGCTTATCAGGTGTTCAAAGAAATGAGTGGAAACAGGAATCTGATCACATGGAATTCAATTATCTCAGGAATGCTGTTGAATGGTGAATGTGATATTGCTCTCGAGCTGTTCTCTAGGTTGGAATCTGAACGACTAGTGCCTGATTCCGCAACTTGGAATACAATGATCAGTGGGTTGACACGTCAAGGAAAATGCACGGAAGCATTTCATCTTTTCACCAATATGATATCAGTAGGAGTTATGCCGAGTTTGAAGTCTCTTACTAGTCTTCTACCAGCATGTGCTTTGATGTCTTCTTTGCGGCAGGGGAGGGAAATTCATGCACATGCTACTAGAGCCTGTGTCAGTAATGACGAGTTCTTAGCTACTGCCCTCATTGACATGTACATGAAGTGCGGGCAATTTTCAAGGGCACGCAGGATTTTCGACCAATTCGAAATCAAACCTATTGACCCAGCATTTTGGAATGCAATGATTTCAGGGTATGGAAGAAATGGCGAGGAAGAAGCTGCATTTGAGATTTTCAATTTGATGCGTAAAGAGAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_188928.p1 GENE.S_Transcript_188928~~S_Transcript_188928.p1 ORF type:3prime_partial len:469 (+),score=74.09,PPR_2|PF13041.2|0.00049,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|0.021,PPR_2|PF13041.2|9.1e+03,PPR_2|PF13041.2|0.00018,PPR_2|PF13041.2|0.75,PPR_2|PF13041.2|7e-06,PPR_2|PF13041.2|2.4e-10,PPR_2|PF13041.2|0.069,PPR_2|PF13041.2|7.5e-05,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|14,PPR|PF01535.16|0.35,PPR|PF01535.16|4.1e+02,PPR|PF01535.16|0.13,PPR|PF01535.16|0.011,PPR|PF01535.16|0.00033,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|0.059,PPR|PF01535.16|9.4e-08,PPR_1|PF12854.3|5.9e+03,PPR_1|PF12854.3|5,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|6e+03,PPR_1|PF12854.3|19,PPR_1|PF12854.3|13,PPR_1|PF12854.3|0.041,PPR_1|PF12854.3|4.6e-06,PPR_1|PF12854.3|0.48,PPR_1|PF12854.3|0.003,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|25,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|34,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|9.5,PPR_3|PF13812.2|11,PPR_3|PF13812.2|0.47,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|0.0024 S_Transcript_188928:125-1528(+)
MRREIAKLVSNGHFGEAILLYSKLHSSSIPPNKFTFPFLFKACAKLKSHIQGHIFHTHLIKSGFNHDTYAATALTSMYMEFQEIHNAVQVFDEMPQRNEASVNATISGFSQNGFLREALVAFRDVGVSRFRPNSVMIASVLSACDVVEHGGQVHCWAVKIGVERDVYVGTGIVTMYMICSDSVSATKVFGMMECKNVVSYNAFMSGLVQNGVYRVVSNVFKDLLRSSSGVLNSVTLVSVLGACSNVQNLQFGRQAHGVGVKVGLQSDTMLGTALVDLYAKCGCSHLAYQVFKEMSGNRNLITWNSIISGMLLNGECDIALELFSRLESERLVPDSATWNTMISGLTRQGKCTEAFHLFTNMISVGVMPSLKSLTSLLPACALMSSLRQGREIHAHATRACVSNDEFLATALIDMYMKCGQFSRARRIFDQFEIKPIDPAFWNAMISGYGRNGEEEAAFEIFNLMRKEN

Click here to download the sequence:
Link to NCBI Protein BLAST