Transcript Information: S_Transcript_189001.p1


Annotated TAIR IDAT3G25600.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9307367-9307852 | Forward length=161
E-Value9.1E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1356112102305
Replicate 21.225710530973
Replicate 31.9353488482791
Condition 2: 8 Hour
Replicate 12.1062113893465
Replicate 22.7619566221885
Replicate 31.7105309806466
Condition 3: 24 Hour
Replicate 13.1014340758251
Replicate 20.69950035729467
Replicate 30.93414979278208


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_189001.p1 GENE.S_Transcript_189001~~S_Transcript_189001.p1 ORF type:complete len:162 (+),score=32.59,EF-hand_1|PF00036.28|0.00049,EF-hand_1|PF00036.28|6.6e-05,EF-hand_1|PF00036.28|3.2e-07,EF-hand_1|PF00036.28|3.8e-08,EF-hand_7|PF13499.2|8.9e-11,EF-hand_7|PF13499.2|7.1e-14,EF-hand_6|PF13405.2|0.00019,EF-hand_6|PF13405.2|0.012,EF-hand_6|PF13405.2|4.6e-07,EF-hand_6|PF13405.2|0.012,EF-hand_5|PF13202.2|0.00026,EF-hand_5|PF13202.2|0.0021,EF-hand_5|PF13202.2|0.00026,EF-hand_5|PF13202.2|0.00062,EF-hand_8|PF13833.2|1.6,EF-hand_8|PF13833.2|0.0011,EF-hand_8|PF13833.2|0.00047,EF-hand_8|PF13833.2|6.8e-12,EF-hand_9|PF14658.2|0.001,EF-hand_9|PF14658.2|0.0096,EF-hand_4|PF12763.3|0.044,EF-hand_4|PF12763.3|1.7e+02,EF-hand_4|PF12763.3|0.1 S_Transcript_189001:147-632(+)
ATGGAGCCAACGGAAACAGAACAAATAAACCTCCTAAAGGACATATTTGCTAGATTCGACATGGACTCGGACGGGAGCCTAACGCTGCTAGAATTAGCAGCCCTTCTTCGGTTCCTCGGCTTGAAGCCCTCAGAGGATCAGCTCCACAAAATCCTAGCTATAATTGATGCAAATGGGAATGGATCAATCGAATTCGAGGAGCTTGTAGAAGCCATATTGCCAGAAATGAATGAAGCAGTATTGGTGAACCAAGACCAGCTATTGGAGGTGTTTAGAATGTTTGATCGGGATGGTAATGGGGTTATAACGGCGGCCGAGCTGGCTGGTGCTATGGCTAAGATGGGTCAGCCTTTGACATATCGAGAATTGACAGAAATGATCAATGAAGCTGATACTGATGGGGATGGGGTCATTAATTTTACTGAGTTTTCTTCTATTATGGCTAGATCTGCTGCTGATTTTCTTGGCCTTAATTTTTCTTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_189001.p1 GENE.S_Transcript_189001~~S_Transcript_189001.p1 ORF type:complete len:162 (+),score=32.59,EF-hand_1|PF00036.28|0.00049,EF-hand_1|PF00036.28|6.6e-05,EF-hand_1|PF00036.28|3.2e-07,EF-hand_1|PF00036.28|3.8e-08,EF-hand_7|PF13499.2|8.9e-11,EF-hand_7|PF13499.2|7.1e-14,EF-hand_6|PF13405.2|0.00019,EF-hand_6|PF13405.2|0.012,EF-hand_6|PF13405.2|4.6e-07,EF-hand_6|PF13405.2|0.012,EF-hand_5|PF13202.2|0.00026,EF-hand_5|PF13202.2|0.0021,EF-hand_5|PF13202.2|0.00026,EF-hand_5|PF13202.2|0.00062,EF-hand_8|PF13833.2|1.6,EF-hand_8|PF13833.2|0.0011,EF-hand_8|PF13833.2|0.00047,EF-hand_8|PF13833.2|6.8e-12,EF-hand_9|PF14658.2|0.001,EF-hand_9|PF14658.2|0.0096,EF-hand_4|PF12763.3|0.044,EF-hand_4|PF12763.3|1.7e+02,EF-hand_4|PF12763.3|0.1 S_Transcript_189001:147-632(+)
MEPTETEQINLLKDIFARFDMDSDGSLTLLELAALLRFLGLKPSEDQLHKILAIIDANGNGSIEFEELVEAILPEMNEAVLVNQDQLLEVFRMFDRDGNGVITAAELAGAMAKMGQPLTYRELTEMINEADTDGDGVINFTEFSSIMARSAADFLGLNFSL*

Click here to download the sequence:
Link to NCBI Protein BLAST