Transcript Information: S_Transcript_18903.p1


Annotated TAIR IDAT5G12080.1
Annotated Gene Namemechanosensitive channel of small conductance-like 10
Annotated Gene Symbol(s)MSL10, ATMSL10
Annotation TypeHomolog
Chromosome Positionchr5:3898182-3900923 | Reverse length=734
E-Value5E-135
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.903080630579
Replicate 29.8248359748308
Replicate 38.7170744770143
Condition 2: 8 Hour
Replicate 15.9561148737305
Replicate 25.2434020249359
Replicate 35.7036545349266
Condition 3: 24 Hour
Replicate 118.559617809392
Replicate 219.919365643274
Replicate 316.157872197028


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18903.p1 GENE.S_Transcript_18903~~S_Transcript_18903.p1 ORF type:complete len:512 (+),score=76.60,MS_channel|PF00924.14|1.6e+03,MS_channel|PF00924.14|4.1e-22 S_Transcript_18903:942-2477(+)
ATGTTGAGAGAAAAAGTGTTGTATTTTGTGTATGGGTTGAGGAAGAGCATTCAAAATTGTGTATGGCTAGCACTTGTGCTTTTGGCTTGGACATGCATGTTTGATGCTCAAGTTCATAAGAGAAATAAGTTGTTGAAGAAGGTGTTTGACTTGCTTGTGGCTGTTTTAGTTGGGGCAACCGTATGGTTGGTCAAGATTATTTTGGTCAAAACTCTTGCTTCTTCCTTTCATGTCAGGACTTACTTTGATCGGATGAAGGAGAGTGTTTTCCATCACTACATACTTGACACACTCTCAGGCCCGCCAATGGATGAAACACTAAGGGAAAAAGAACATAAGCACCTAAATGGGTCAAAAACCTTGCCCGCCAAGTGGAAGCAAGCAAAGGATGCATACAAGTCAAAGAGATACGGGACAAGAAAACTGGATATAGAGAAGCTGAAGAAGCTGAGCATGGCACGTTCAACCTCAGCTTGGAGTGTGAAGAGATTAATGAATTACATAAGATCATATGGTCTTTCTACTGTTTCAAATACTGTTGATGAATTTGGCAAAGCTGAATCTGAGATTACCAGCGAATGGGAGGCAAGAAGCACTGCCAAACGCATCTTCAAGAACGTAGCCAAACGTGGCGCCAGGTACATCGAGGAGGAAGATTTAGCAAGATTCTTAAAGAGGGATGAAATCCATGCAATATTCCCTCTCTTTGAAGGAGCTCTTGAGACAGGAAGGATCACCAAGTCCTCCTTTCGGAACTGGGTGGTACGAGCTTATTTCGAGCGCAAGGCTCTAGCGCATTCATTGAATGACACAAAAACAGCAGTCCAACAACTTCACAAACTGGCTTCAGCCATTGTCATTGTGATTATACTTGTCCTGATGCTCTTGTTTATGGGCTTAGCGACGCCCAAGGTTATTGCGTTTGTCATCACGCAGCTTGTCGTCCTGAGTTTCATATTCAATAACACATGTAAAACCATCTTTGAGTGCATTATCTTTGTCTTTGTGATGCATCCTTTCGACATTGGGGATCGCTGCAAAATCGATGGTGTCCAGATGATTGTGGAAGAGATGAATATACTGACAACTGTATTCCTGAGGTATGACATGGAGAAGATCTATTATCCCAACTCAGCTCTTCTCAACAAGCCAATAAGTAACTTCTATCGAAGTCCCGAGATGGGTGATGTGGTTAATTTCACCATGGATGTCTCCACTCCCATTGAAACCATAAATGCCTTCAAAAAGGCAATACAGAGCTACATTGAAAGCAAGCCAAATCATTGGAACACAAATCACAGCATCATAATAAGGGAGATAGAAGACTTGAACAAAATGAAGATGGCCCTAGCTGTGCAACACACTATCAACCATCAAAACTATGGTGAACGCAACATTCGTATCACTGAGCTTATTTTGGAAATGAAGAAGATTTTTGAGAACCTCGGTATCAAATATCACCTTCTTCCACAGCAGATCCATATTACACAATTCAACAATGCCGGCAATTCAACAATACCACCAGCATCACAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18903.p1 GENE.S_Transcript_18903~~S_Transcript_18903.p1 ORF type:complete len:512 (+),score=76.60,MS_channel|PF00924.14|1.6e+03,MS_channel|PF00924.14|4.1e-22 S_Transcript_18903:942-2477(+)
MLREKVLYFVYGLRKSIQNCVWLALVLLAWTCMFDAQVHKRNKLLKKVFDLLVAVLVGATVWLVKIILVKTLASSFHVRTYFDRMKESVFHHYILDTLSGPPMDETLREKEHKHLNGSKTLPAKWKQAKDAYKSKRYGTRKLDIEKLKKLSMARSTSAWSVKRLMNYIRSYGLSTVSNTVDEFGKAESEITSEWEARSTAKRIFKNVAKRGARYIEEEDLARFLKRDEIHAIFPLFEGALETGRITKSSFRNWVVRAYFERKALAHSLNDTKTAVQQLHKLASAIVIVIILVLMLLFMGLATPKVIAFVITQLVVLSFIFNNTCKTIFECIIFVFVMHPFDIGDRCKIDGVQMIVEEMNILTTVFLRYDMEKIYYPNSALLNKPISNFYRSPEMGDVVNFTMDVSTPIETINAFKKAIQSYIESKPNHWNTNHSIIIREIEDLNKMKMALAVQHTINHQNYGERNIRITELILEMKKIFENLGIKYHLLPQQIHITQFNNAGNSTIPPASQ*

Click here to download the sequence:
Link to NCBI Protein BLAST