Transcript Information: S_Transcript_189342.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value4E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28311703441681
Replicate 20
Replicate 30.39239864007661
Condition 2: 8 Hour
Replicate 10
Replicate 21.9039871182746
Replicate 30
Condition 3: 24 Hour
Replicate 10.69717713267854
Replicate 21.2055218923589
Replicate 30.53663924266204


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_189342.p1 GENE.S_Transcript_189342~~S_Transcript_189342.p1 ORF type:internal len:94 (+),score=16.11,UBN2|PF14223.2|5.8e+02,UBN2|PF14223.2|3.5e-11 S_Transcript_189342:3-281(+)
GAGGATGAAAGTACATTAAGTGAAACACAGAAGAAGCTTCATGAAGAAAGGATGAAGGATGCAAAGGCTTTATATTTGATACAACAAGGTGTTACGGATGTAATATTTCCAAGGATTTTGAGAGCTAATACCGCAAAGAAAGCACGAGAGATTCTACAACAAGAATTCCAGGGAGACATCAAGGTGAGAAGTATTAAACTTCAATCTTTAACAAGAGAATTTGAAAACTTAAAAATGAAAAACAATGAGCTAATGAAAGATTACTTTTCAAAGGTGATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_189342.p1 GENE.S_Transcript_189342~~S_Transcript_189342.p1 ORF type:internal len:94 (+),score=16.11,UBN2|PF14223.2|5.8e+02,UBN2|PF14223.2|3.5e-11 S_Transcript_189342:3-281(+)
EDESTLSETQKKLHEERMKDAKALYLIQQGVTDVIFPRILRANTAKKAREILQQEFQGDIKVRSIKLQSLTREFENLKMKNNELMKDYFSKVI

Click here to download the sequence:
Link to NCBI Protein BLAST