Transcript Information: S_Transcript_18948.p1


Annotated TAIR IDAT1G20110.1
Annotated Gene NameRING/FYVE/PHD zinc finger superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6971554-6974578 | Forward length=601
E-Value1E-135
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.216894552825
Replicate 214.188527964597
Replicate 314.37539866449
Condition 2: 8 Hour
Replicate 120.535561046128
Replicate 219.735435500365
Replicate 318.660337970691
Condition 3: 24 Hour
Replicate 116.328498770747
Replicate 212.247615346814
Replicate 314.139630954383


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18948.p1 GENE.S_Transcript_18948~~S_Transcript_18948.p1 ORF type:5prime_partial len:594 (+),score=105.80,FYVE|PF01363.17|8.8e-20,FYVE|PF01363.17|1e+04 S_Transcript_18948:3-1784(+)
GCTTGTTTATGGGTTATATTCGAAATAGAACCCAACGCCCAGGTAGCTTCCAAGTTGGCGGGTGAAAGCTTGTCAAGGAAACTACCAGCATCATCTCGTCTTTCTCTTTCTTCTTCTGTTTTTGCTTTCCCTTATTCTTCCTTCTACACAATCCATTCCTCTCCTCATCTTGCTTCGTTCTCTCTATCCAAAATTCCCAATCTCAATTTCCTCACCCTCATCAATCCAAAATCAATAATCTCTTCGAATACACCTCTTTCGAGCCTAGTTCCTCCGTTAAAAAAAATGCATCAAGGCGACACAACCAATTCCTTCTACCAATTCTATCAACCTCACTTCCACCATCCTAACCCTAACCCTAATCCAATCGATCCTCCCGTGACTCCATGGCCGGTAGCTTCAGCTTCTGCTCCTCCAGTTTCCTCCTCTGATTACCCTAATTATTCCACCGTATACCCTCCTTACCCTCAGAATCCCGATCATGTCCTCAATTCAGCTCCTTCAGCTCCATCTTCTGTTTATCCCCCAAACCCTAACCCCCAATTCTCCGCTCCCCCTAATTACTCGTACGATCAGAACCCCCCTTCCTATTACCCCTACGACCAAATCCCCACCCCTGCCCCGAACCCGACCCAATCTTATTCGGGTTCTCAGTACGATGATGGCGTGAAATATGACCGTTATGGGGAGTACAGTTCACAGGGTTACTGTGATGATGGAGTTTACAGGTATGAGGGTGGGAATAAGGAGCCCTATGGGGCCCGAGGTACAGCCGGCTCTTCCTGGTCCTCCTCACAGGTGATGTTCGATGATTATGGCCGGCCCATCAATATTTCTAATGGTAATGGGAATGGGAATGGGATTGATCGGGGCGAGTTGAAGGCCCTGCAAGTGGTGAAAGCGATTCCCAAGGATGATCCAGAAGAGGACTTGAAGGGTGGTGTCCAGAAGTTCCGTGTTAAAGTCTTGTGTGAGGGTTATGGTCAGACTGATTTGGATGTCCTTTGCCAGATTGGTTTGGATGGGATTAGAATGCTTGATCCTTCTACCAACCGGACATTGAGAATCTATCCTCTAGAAACAGTGACAAGATGGGAGGTGTTGGATTCACATATCTTTGCATTTTGGGCGAAAATGCCAGTAGATGTAGAACCAAATCGAATAAGGCTGAAATCAAACAGTTATACTACAAATACCATCTTGGACATAGTTACAGCAGCAAGTGTGCAGCTTAAGGAGATTGGTGAAAGAAAAGAATCCCACTCATCCAAGGCCTTTGAGCAGCATGTTGAGAGGAAGAAAGGTCTGGCTGACTGGATGAACTTGATGAAACCCCAAGATGAGGAGAAAGATCATTGGGTACCTGATGAAGCAGTCAACAAATGTACTTCTTGCGGCACAAATTTTAATGCTTTTGTGCGGAAGCATCACTGCAGAAATTGTGGTGAGATATTTTGTGACAAATGTACTCAAGGAAGAACTCCTCTTACTATGGAAGAGCTAGCACCAGCTGTTCGTGTTTGTGATCGATGCATGGCAGAAGTTACTCAGAGACTGGCTAATGCTAAGGAGGCTACAAATCGAAATGGCTCATTGCCTAGTCATGAGGATTTGGCAAGAAAACTTAAGGAGGAGATGAACAGAAATATGAAGACATCTACAGGTTCAAAGTCTGAAGGGTCTCAGACACAGATGAGAGAAGTTGCCTGTCCAATCTGTACAGTTCACTTGCAGGTGCAAGTCCCAACCTCAGGTTCAGAGACAATCGAGTGCAGTATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18948.p1 GENE.S_Transcript_18948~~S_Transcript_18948.p1 ORF type:5prime_partial len:594 (+),score=105.80,FYVE|PF01363.17|8.8e-20,FYVE|PF01363.17|1e+04 S_Transcript_18948:3-1784(+)
ACLWVIFEIEPNAQVASKLAGESLSRKLPASSRLSLSSSVFAFPYSSFYTIHSSPHLASFSLSKIPNLNFLTLINPKSIISSNTPLSSLVPPLKKMHQGDTTNSFYQFYQPHFHHPNPNPNPIDPPVTPWPVASASAPPVSSSDYPNYSTVYPPYPQNPDHVLNSAPSAPSSVYPPNPNPQFSAPPNYSYDQNPPSYYPYDQIPTPAPNPTQSYSGSQYDDGVKYDRYGEYSSQGYCDDGVYRYEGGNKEPYGARGTAGSSWSSSQVMFDDYGRPINISNGNGNGNGIDRGELKALQVVKAIPKDDPEEDLKGGVQKFRVKVLCEGYGQTDLDVLCQIGLDGIRMLDPSTNRTLRIYPLETVTRWEVLDSHIFAFWAKMPVDVEPNRIRLKSNSYTTNTILDIVTAASVQLKEIGERKESHSSKAFEQHVERKKGLADWMNLMKPQDEEKDHWVPDEAVNKCTSCGTNFNAFVRKHHCRNCGEIFCDKCTQGRTPLTMEELAPAVRVCDRCMAEVTQRLANAKEATNRNGSLPSHEDLARKLKEEMNRNMKTSTGSKSEGSQTQMREVACPICTVHLQVQVPTSGSETIECSI*

Click here to download the sequence:
Link to NCBI Protein BLAST