Transcript Information: S_Transcript_18969.p1


Annotated TAIR IDAT5G07120.1
Annotated Gene Namesorting nexin 2B
Annotated Gene Symbol(s)SNX2b
Annotation TypeOrtholog
Chromosome Positionchr5:2207065-2209355 | Reverse length=572
E-Value1.5E-244
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9746275478241
Replicate 27.9948784459287
Replicate 37.3256861098623
Condition 2: 8 Hour
Replicate 18.1363422986971
Replicate 29.198181670689
Replicate 38.9868207672569
Condition 3: 24 Hour
Replicate 19.5523793660961
Replicate 29.2787381889227
Replicate 38.8321096261818


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18969.p1 GENE.S_Transcript_18969~~S_Transcript_18969.p1 ORF type:complete len:574 (+),score=142.11,PX|PF00787.20|5.1e-20,Vps5|PF09325.6|5.9e+03,Vps5|PF09325.6|2.4e-17 S_Transcript_18969:469-2190(+)
ATGATGGGCTCTGAGAGCCAAGGCTCAGAAGAGCCGGCCCATAATCACCCACTAGCTCAAACCGAAGAAGATATGGAAACCCTAGTTCTTGATGACCCATTGTCATCTTCCAAATCATCGCTTGCCAATTATAAAAGTGCGATTTCGACTTTATCTGAATCAAATCAGCATCAACATCATCCTTTATCACCCTCGGTTGTCGCTCAACCTGCTGATTCAGATCCCTTGTTGTCTTATGTGTCTGAGAGGGATCAATTTAGCCCTAAAGGTCATGATAATTCACATTTTGAGGACTCTGATTACTCTGACTTGCTTATTAGCCCTAATGGTGAGGTTAATGGTGGGGATTCCAATGGTTTCAACAGCCCTAACTCGGACTCAGTGGCCTCAAATAACGCACTAGGATCTGATTATTTGAAGATCAGTGTCTCAAATCCTCAGAAAGAGCATGAGGGTTCGTCTAATTCGATTGTTCCAGGGGGTAACACTTATGTGACATATTTGATCACTACGTGGACGAATATGAGGGGTTTTGGTGGTCCTGAGTTTAGTGTTAGGAGGAGGTTCAGGGATGTGGTTACGTTGGCCGATAGGTTATCAGAGTCATATAGAGGGTTTTTCATTCCAGCTAGGCCTGATAAGAGTGTGGTGGAGAGTCAAGTCATGCACAAGCAGGACTTTGTTGAGCAAAGGAGAGTCGCCTTGGAGAAGTACTTGCGGAAATTGGCAGCTCATCCTGTGATTAGGAAAAGCGATGAGTTGAGAGTGTTTTTACAAGTGCCTGGGAAGCTTCCTTTACCCACGAGCACTGATGTGGCATCGAGGGTGCTTGATGGAGCCGCCAAGTTACCAAAGCAGTTGTTTGGGGACTCTAGGAGTGTCATAGCTCCTCAAGAGGCAGTCCAACCAGCGAAAGGAGGAAGAGATCTGCTGAGGCTATTCAAGGAGCTGAAACAGTCCGTGACAAATGATTGGGGAAATTCAAGGCCGCCACTTGTTGAAGAGGACAAGGAGTTTTTGGAGAAGAAAGAAAAGCTACATGATTTTGAGCTGCGTCTCACTGATGCATCTAAGCAGGCAGAGTTGCTTGTCAAAGCTCAACAAGATATGGGAGATACAATGGGAGAATTGGGGCTATCATTTATCAAGTTGACAAAATTTGAGAATGAGAAAGTGCTTCTCGACACTCAAAAAGCACGTGCTGCTGACATGAAGAACGTAGCAACAGCTACTGTCAAAGCAAGCAGAATATACAGGGAACTAAATGCAAAAACAGTAAAAGACCTGGATATTCTTCATGAGTACCTCGGGGTTATGTTAGCTGCTCGTAATGCATATTCAGATCGTGCAAGTGCTTTGTTGACAGTACAAACTCTTCTGTCGGACCTATCATCGTTGCAATCTAAGGCTGAAAAACTTGAGGCCGCATCATCCAAGGTCTTTGGTGGTGACAAGTCAAGGAATCAAAAATTGGAAGAGTTGGAGGAAACCCTGAGAATCACTGAGGATTCAAAGAACTGTGCAGTTAGAGAATATGAGCAAATCAAGGAAAATAACAGGAGTGAGCTTGAAAGACTCGAAAGAGAAAAACGAGCAGCTTTTTTGAACATGTTGAAGGGGTTTGTAGGTGATCAGGTAACCTGTGCTGAGAAAATGTCTAATTTGTGGTCGAAGGTTGCAGAGGATACCAGAGGATATGCAAAAGAGACTCCCACTAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18969.p1 GENE.S_Transcript_18969~~S_Transcript_18969.p1 ORF type:complete len:574 (+),score=142.11,PX|PF00787.20|5.1e-20,Vps5|PF09325.6|5.9e+03,Vps5|PF09325.6|2.4e-17 S_Transcript_18969:469-2190(+)
MMGSESQGSEEPAHNHPLAQTEEDMETLVLDDPLSSSKSSLANYKSAISTLSESNQHQHHPLSPSVVAQPADSDPLLSYVSERDQFSPKGHDNSHFEDSDYSDLLISPNGEVNGGDSNGFNSPNSDSVASNNALGSDYLKISVSNPQKEHEGSSNSIVPGGNTYVTYLITTWTNMRGFGGPEFSVRRRFRDVVTLADRLSESYRGFFIPARPDKSVVESQVMHKQDFVEQRRVALEKYLRKLAAHPVIRKSDELRVFLQVPGKLPLPTSTDVASRVLDGAAKLPKQLFGDSRSVIAPQEAVQPAKGGRDLLRLFKELKQSVTNDWGNSRPPLVEEDKEFLEKKEKLHDFELRLTDASKQAELLVKAQQDMGDTMGELGLSFIKLTKFENEKVLLDTQKARAADMKNVATATVKASRIYRELNAKTVKDLDILHEYLGVMLAARNAYSDRASALLTVQTLLSDLSSLQSKAEKLEAASSKVFGGDKSRNQKLEELEETLRITEDSKNCAVREYEQIKENNRSELERLEREKRAAFLNMLKGFVGDQVTCAEKMSNLWSKVAEDTRGYAKETPTK*

Click here to download the sequence:
Link to NCBI Protein BLAST