Transcript Information: S_Transcript_189869.p1


Annotated TAIR IDAT5G53120.6
Annotated Gene Namespermidine synthase 3
Annotated Gene Symbol(s)SPDS3
Annotation TypeOrtholog
Chromosome Positionchr5:21535429-21537653 | Forward length=386
E-Value4.3E-203
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.738886811814
Replicate 243.402208965603
Replicate 330.838673451267
Condition 2: 8 Hour
Replicate 128.49211984994
Replicate 230.868261101262
Replicate 331.274891158128
Condition 3: 24 Hour
Replicate 134.796631352504
Replicate 233.066872627786
Replicate 334.111781367575


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_189869.p1 GENE.S_Transcript_189869~~S_Transcript_189869.p1 ORF type:complete len:366 (-),score=82.00,Spermine_synth|PF01564.13|2.1e-85 S_Transcript_189869:243-1340(-)
ATGGAGGGCGGCGCAGGAAGAGGTTTGGAATGCCAGAAGATTATGGATGGGAAGGCGAGTGATGGCAAGGAGAAGGCAATCCCGTCTTGCTGCTTAAAGGCTAGAGCCGCCATCCCTGAATCCGATGCTAAATGTCATTCTACTGTGGTTTCTGGGTGGTTTTCGGAACTCAAATTGTCCAATGACCAAACTGGGAAGCAGCTTTATTACAACAATCCAATGTGGCCTGGAGAAGCACATTCCATGAGAGTGGAGGAGATATTGTTTCAGGAAAGATCAAAGTACCAAGAAGTCCTTGTTTTTAAGTCATCAACCTATGGGAATGTACTCGTGCTTGATGGCATCGTTCAATTGACTGAAAAAGATGAATGCGCATACCAGGAGATGATAACTCATCTTCCACTCTGTTCAATTGAATCCCCGAAAAATGTCCTGGTAGTAGGTGGTGGTGATGGTGGAGTTCTGCGAGAAATTTCTCGTCATACCTCCGTGGAGAACATAGAGATTTGTGAAATTGATGAGATGGTTATAGAGGTCTCTAAGAAGTTCTTTCCAGAGTTGGCTCTTGGATTTGAAGATCCTCGTGTCCATCTTCACATTGGTGATGCTGCCGAGTTCCTGAGGAGTGCGCCAGCAGGGAAATATGATGCCATAGTTGTGGATTCTTCAGACCCTGTAGGTCCGGCCGTAGAGCTTGTTGAGAAGCCCTTCTTTGAGACAGCAGCCAGAGCATTGAGGCCTGGTGGTGTGCTTTGTAACATGGCGGAGAGTATGTGGCTCCACACCCATCTTATTGACGAAATGATATCGGTTTGCCGTGAAACTTTCAAGCAAGTTCGTTATGCATGGACTAGTGTACCTACTTATCCAAGTGGTGTCATTGGATTTCTGGTATGCTCAACAGAGGGGCCACCAGTAGACTTTCTCAATCCAATTAACCCTATTGAGAAGATAGAAGGAGCTCTCAAGCATCGGAGAGAACTTAGGTTTTATAACTCTGAGCTCCACACTGCTGCCTTTGCACTGCCTACATTTGTGAAGCGGGAGGTCCATTCCCTCTGTGGTTCCCCTTCTACCAATGGAGTTCAAGTCTCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_189869.p1 GENE.S_Transcript_189869~~S_Transcript_189869.p1 ORF type:complete len:366 (-),score=82.00,Spermine_synth|PF01564.13|2.1e-85 S_Transcript_189869:243-1340(-)
MEGGAGRGLECQKIMDGKASDGKEKAIPSCCLKARAAIPESDAKCHSTVVSGWFSELKLSNDQTGKQLYYNNPMWPGEAHSMRVEEILFQERSKYQEVLVFKSSTYGNVLVLDGIVQLTEKDECAYQEMITHLPLCSIESPKNVLVVGGGDGGVLREISRHTSVENIEICEIDEMVIEVSKKFFPELALGFEDPRVHLHIGDAAEFLRSAPAGKYDAIVVDSSDPVGPAVELVEKPFFETAARALRPGGVLCNMAESMWLHTHLIDEMISVCRETFKQVRYAWTSVPTYPSGVIGFLVCSTEGPPVDFLNPINPIEKIEGALKHRRELRFYNSELHTAAFALPTFVKREVHSLCGSPSTNGVQVS*

Click here to download the sequence:
Link to NCBI Protein BLAST