Transcript Information: S_Transcript_18999.p1


Annotated TAIR IDAT3G15290.1
Annotated Gene Name3-hydroxyacyl-CoA dehydrogenase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5145054-5146613 | Forward length=294
E-Value7.2E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.387833907824
Replicate 224.866756123353
Replicate 329.298661002375
Condition 2: 8 Hour
Replicate 133.6641613033
Replicate 231.051228045105
Replicate 325.593275218021
Condition 3: 24 Hour
Replicate 136.895204557693
Replicate 223.497597286514
Replicate 327.077847003486


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18999.p1 GENE.S_Transcript_18999~~S_Transcript_18999.p1 ORF type:complete len:299 (+),score=53.78,3HCDH_N|PF02737.14|2.7e-63,3HCDH|PF00725.18|6.6e-33,NAD_binding_2|PF03446.11|4.4e-07 S_Transcript_18999:252-1148(+)
ATGGCGGAGAACGATACAATTGGGGTTATAGGGGCAGGCCAAATGGGCTCAGGAATTGCCCAGCTTGCTTCTGTTCACGGCTTCCAAGTTTGGCTTCTTGATTCTGATCCTAATGCCCTCACTAGAGCCGTCAAATCCATCACCAATTCTCTCCAACGTTTTTCTAATAAAGGCCAACTTTCCCAGGCTACTGCTTATGAAGCTCTGCAACGCCTGCACTGTACCACAACTTTGGAGGCTTTGCACTCTGCAGACTTTGTTATTGAAGCGATTGCAGAATCAGAAGTTACTAAGAAAAAGCTATTCACTGAGCTCGACAAGATCACAAAATCTTCTGCCATCTTAGCATCTAACACTAGTTCTATATCCATTACACGGCTTGCTTCTGTAACAAGCCGCCCCAAGCAGGTTATTGGCATGCATTTCATGAATCCTCCTCCTATAATGAAGTTGGTTGAGATTATAAGAGGTGCAGATACATCAGATGAGACTTTCAATGCAACAAAGCTTTTGGCAGAGAGGTTTGGTAAAACAATTGTATGCTCTCAGGACTATTCAGGGTTCATTGTAAACCGAATCTTAATGCCTATGATAAATGAAGCGTTTTTCACATTGTATACTGGGGTGGCAACCAAGGAAGACATTGATACAGGAATGAAGCTAGGGACAAACCAACCAATGGGTCCACTTGAGCTTGTCGATTTCATTGGGTTAGATGTTTGTCTATCGATACTGAAAGTTCTTCATGCTGGCCTCGGGGATGTTAAGTATGCTCCTTGCCCTCTTCTTGTTCAGTATGTTGATGCTGGTCGTCTTGGGAGAAAGTGTGGCATTGGGGTATATGACTATCGGAAAACGCCAAACACTATGAAAATCAAACAGCCTGCCAGACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18999.p1 GENE.S_Transcript_18999~~S_Transcript_18999.p1 ORF type:complete len:299 (+),score=53.78,3HCDH_N|PF02737.14|2.7e-63,3HCDH|PF00725.18|6.6e-33,NAD_binding_2|PF03446.11|4.4e-07 S_Transcript_18999:252-1148(+)
MAENDTIGVIGAGQMGSGIAQLASVHGFQVWLLDSDPNALTRAVKSITNSLQRFSNKGQLSQATAYEALQRLHCTTTLEALHSADFVIEAIAESEVTKKKLFTELDKITKSSAILASNTSSISITRLASVTSRPKQVIGMHFMNPPPIMKLVEIIRGADTSDETFNATKLLAERFGKTIVCSQDYSGFIVNRILMPMINEAFFTLYTGVATKEDIDTGMKLGTNQPMGPLELVDFIGLDVCLSILKVLHAGLGDVKYAPCPLLVQYVDAGRLGRKCGIGVYDYRKTPNTMKIKQPARL*

Click here to download the sequence:
Link to NCBI Protein BLAST