Transcript Information: S_Transcript_19018.p1


Annotated TAIR IDAT5G09880.1
Annotated Gene NameSplicing factor, CC1-like
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3081646-3085179 | Reverse length=527
E-Value5E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.13751115371
Replicate 28.2380373025914
Replicate 37.8361840011865
Condition 2: 8 Hour
Replicate 110.250831397077
Replicate 212.962229898554
Replicate 310.337728666794
Condition 3: 24 Hour
Replicate 18.4379378289849
Replicate 210.407844801155
Replicate 39.9589188209042


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19018.p1 GENE.S_Transcript_19018~~S_Transcript_19018.p1 ORF type:internal len:233 (+),score=56.27,RRM_1|PF00076.18|1e-09,RRM_6|PF14259.2|5.8e-06 S_Transcript_19018:1-696(+)
AGAGAAGGAGAAAGGAGTGATAGAGATGGGGAAAGGCATAAAAGTAGCAGAGAAAGAGAACATAGAGATAAGTATAGAGAAAGAGAGGAGAGGAATGGGAGGGACCGTGATCGGGATAGGGAACGGGAACGTGACCGTGATCGTGAAAGGAAAGAACGTGACCATGAGAAGGAAGTCGAGATCAACAGGAATGAACGCGAACACCGTAGCAGGAGTCGTTCAGATAGACATCGGGATGATAGGGAGAGGAGTCAAGACAGGGAAGTTAGGGGAAAGAGCAGAGACAGGGAAGTTAGGGGAAAGAGCAGAGACAGGGAAGTTAGGGGAAAGAGCAGAGACAGGGAAGTAAGGGAGAGGAGCCGGGAAAGGGAATACAGAGAAAGGAGTCGGGATAGGGAGCGCAGAGAAAGGAGTCGAGACATTGAGCCACGTGACAAAGAAAGCCGACGGCACAAGGAAAAGAAGGAAGAAGCAGCAGAGCCAGAGGCTGATCCTGAACGGGATCAAAGGACAGTTTTTGCTTATCAGCTCCCTCTGAGGGCAGATGAAAGAGATATTTTCGAATTTTTCTCTAGAGCAGGCAAGGTGCGGGATGTACGGCTCATAATGGATAGGAATTCAAGACGATCCAAGGGTGTGGGGTATATTGAGTTTTACGACGTAATGTCAGTTCCAATGGCTATAGCACTCTCAGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19018.p1 GENE.S_Transcript_19018~~S_Transcript_19018.p1 ORF type:internal len:233 (+),score=56.27,RRM_1|PF00076.18|1e-09,RRM_6|PF14259.2|5.8e-06 S_Transcript_19018:1-696(+)
REGERSDRDGERHKSSREREHRDKYREREERNGRDRDRDRERERDRDRERKERDHEKEVEINRNEREHRSRSRSDRHRDDRERSQDREVRGKSRDREVRGKSRDREVRGKSRDREVRERSREREYRERSRDRERRERSRDIEPRDKESRRHKEKKEEAAEPEADPERDQRTVFAYQLPLRADERDIFEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSG

Click here to download the sequence:
Link to NCBI Protein BLAST