Transcript Information: S_Transcript_190188.p1


Annotated TAIR IDAT5G59710.1
Annotated Gene NameVIRE2 interacting protein 2
Annotated Gene Symbol(s)VIP2, AtVIP2
Annotation TypeOrtholog
Chromosome Positionchr5:24058157-24061736 | Forward length=614
E-Value1.8E-120
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0095061148575
Replicate 26.8135085398208
Replicate 36.9973910434838
Condition 2: 8 Hour
Replicate 16.5857823038205
Replicate 27.6985479142589
Replicate 36.6455289592001
Condition 3: 24 Hour
Replicate 16.8104636764794
Replicate 25.9325859714556
Replicate 37.1215184202681


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_190188.p1 GENE.S_Transcript_190188~~S_Transcript_190188.p1 ORF type:3prime_partial len:340 (-),score=63.18 S_Transcript_190188:2-1018(-)
ATGCATGGTGGATTTAATGTTCCAAATATGTCGGGTACACTTACGTCCAGAAATTCATCTATGAATAGTGTTGCCTCTGTTGGGGTTCAACAACCCACTGGAAATGTTCCAGGGGGGCGTTTTACATCAAATAATATTCCCGTTGCTCTGTCTCAGATATCTCATGGAAGCTCACATGGTGGATATTCAGGAGTTACAAATAGAGGAGGTATGAATGTTGTAGGAAGCCCTGGGTATAATAGTAACACAAATGGTGTTGGTGGTTCTATTCCTGGGATTCTTCCAACTTCTGCTGCAATTGGTAATCGTAATGCTGTTCCAGGCCTAGGTGTCTCCCCTGTTTTGGGAAATGCAGGTCCTCGAGTTTCAGGTTCGATGGGAAGTATGGTTGGCAGTGGAAGCATTGGGAGGAATATAAGCTCTGGAGGTCTCTCTATGCCTGCTCTTGCTTCTCGTCTGAATATGTCCACAAACAGCGGATCTGGGAGCTTAGGAGTGCAGGGACCTAACAGATTAACAAGTGGCGTACTTCAACAAGCTTCACTGCAGGTACTTAACATGTTTGGAAACTCCTACCCTTCTGCTGGGGGGCCACTCTCGCAGAGCCATGTCCAAGCAGTAAATAATTTAAGTTCCATGGGGATGTTAAGTGATGATAACTCCAATGACAGTTCCCCTTTTACGCTAAATGACTTTCCTCAGCTCGGCAGTCGACCTAACTCTGCTGGGGGTCCTCAAGGACAATTAGGTTCATTGAGAAAAGGCCTTGGAGTCAGTCCTATTGTTCAGCAAAACCAGGAATTCAGCATCCAAATGAGGATTTTCCTGCCTTGCCAGGTTTCAAAGGTGGAAGTGCTGATTATGGAATGGACTTCCAGCAAAAGGAACAGATTCATGATAATGGAGTACCTATGGGCCAATCTCAACACTTCTCTATGGGGAGGTCGCCGGGATTTAACTTGGGAGGAATGTACTCATCTCATCGTCCACAGCAACAACAGCAGCAGCAGCAGCAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_190188.p1 GENE.S_Transcript_190188~~S_Transcript_190188.p1 ORF type:3prime_partial len:340 (-),score=63.18 S_Transcript_190188:2-1018(-)
MHGGFNVPNMSGTLTSRNSSMNSVASVGVQQPTGNVPGGRFTSNNIPVALSQISHGSSHGGYSGVTNRGGMNVVGSPGYNSNTNGVGGSIPGILPTSAAIGNRNAVPGLGVSPVLGNAGPRVSGSMGSMVGSGSIGRNISSGGLSMPALASRLNMSTNSGSGSLGVQGPNRLTSGVLQQASLQVLNMFGNSYPSAGGPLSQSHVQAVNNLSSMGMLSDDNSNDSSPFTLNDFPQLGSRPNSAGGPQGQLGSLRKGLGVSPIVQQNQEFSIQMRIFLPCQVSKVEVLIMEWTSSKRNRFMIMEYLWANLNTSLWGGRRDLTWEECTHLIVHSNNSSSSSN

Click here to download the sequence:
Link to NCBI Protein BLAST